RNA–Protein interactions for RNA: ENST00000472883.1

CDK5RAP2-208, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 389 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-208	ENST00000472883	WDR78	Q5VTH9	848 aa		9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	KRT40	Q6A162	431 aa		9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	DPP9	Q86TI2	863 aa		9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	ANKS1A	Q92625	1134 aa		9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	ZNF594	Q96JF6	807 aa	Predicted RBP	9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	SLC5A4	Q9NY91	659 aa		9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	PRKAG3	Q9UGI9	489 aa		9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	SETX	Q7Z333	2677 aa	Known RBP	9.11	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	ZNF536	O15090	1300 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	ELP1	O95163	1332 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	GRXCR2	A6NFK2	248 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	MOXD2P	A6NHM9	499 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	NPM3	O75607	178 aa	Known RBP	9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	IL9	P15248	144 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	IER5L	Q5T953	404 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	PTCRA	Q6ISU1	281 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	MBIP	Q9NS73	344 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	FAM50B	Q9Y247	325 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	FOCAD	Q5VW36	1801 aa		9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	TRIP12	Q14669	1992 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	EPOP	A6NHQ4	379 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	USP17L10	C9JJH3	530 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	CNMD	O75829	334 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	CA3	P07451	260 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	ASNS	P08243	561 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	SLURP2	P0DP57	97 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	ATP2A2	P16615	1042 aa	Known RBP	9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	CDK7	P50613	346 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	GRB10	Q13322	594 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	LMBR1L	Q6UX01	489 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	LBX2	Q6XYB7	198 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	OTOP2	Q7RTS6	562 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	RPUSD2	Q8IZ73	545 aa	Known RBP	9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	LINS1	Q8NG48	757 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	GINM1	Q9NU53	330 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	TRIM35	Q9UPQ4	493 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	NDUFB9	Q9Y6M9	179 aa		9.09	□□□□□ -0.95
CDK5RAP2-208	ENST00000472883	PARP14	Q460N5	1801 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	C19orf67	A6NJJ6	358 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	TLR3	O15455	904 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	LPXN	O60711	386 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PGK1	P00558	417 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	LDHB	P07195	334 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	KCNA5	P22460	613 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ADORA2A	P29274	412 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ACLY	P53396	1101 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ZP2	Q05996	745 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	HERC4	Q5GLZ8	1057 aa	Predicted RBP	9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	SUGP1	Q8IWZ8	645 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ARNTL2	Q8WYA1	636 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ATOH1	Q92858	354 aa	Predicted RBP	9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PPP1R12C	Q9BZL4	782 aa		9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	HERC5	Q9UII4	1024 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	CLSPN	Q9HAW4	1339 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	SALL1	Q9NSC2	1324 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L15	C9J2P7	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L13	C9JLJ4	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L11	C9JVI0	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L18	D6R9N7	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L22	D6RA61	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L17	D6RBQ6	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L19	D6RCP7	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L20	D6RJB6	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ELL2	O00472	640 aa	Predicted RBP	9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ADAMTS4	O75173	837 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ZNF853	P0CG23	659 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PRDX5	P30044	214 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	TAP1	Q03518	808 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L24	Q0WX57	530 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	NEUROD2	Q15784	382 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	SLF2	Q8IX21	1173 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	GLT1D1	Q96MS3	346 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	CERS4	Q9HA82	394 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	DDX4	Q9NQI0	724 aa	Known RBP	9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	FAM86C1	Q9NVL1	165 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	TRPC6	Q9Y210	931 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	COL4A6	Q14031	1691 aa		9.07	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	MED19	A0JLT2	244 aa	Predicted RBP	9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PRR23A	A6NEV1	266 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	FAM196B	A6NMK8	535 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ARVCF	O00192	962 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PDE8B	O95263	885 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PFKM	P08237	780 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	CYP2C18	P33260	490 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	NUBP1	P53384	320 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	NCBP3	Q53F19	620 aa	Known RBP	9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PRAMEF19	Q5SWL8	479 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	USP17L2	Q6R6M4	530 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ADHFE1	Q8IWW8	467 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	FAM126B	Q8IXS8	530 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	ABRA	Q8N0Z2	381 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	KLHDC9	Q8NEP7	349 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PHOSPHO2	Q8TCD6	241 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	NEK9	Q8TD19	979 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	EDA	Q92838	391 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	PBXIP1	Q96AQ6	731 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	SLC9A7	Q96T83	725 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	STK31	Q9BXU1	1019 aa		9.06	□□□□□ -0.96
CDK5RAP2-208	ENST00000472883	TANC1	Q9C0D5	1861 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms