RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SNAPC2Q13487 334 aa19.72■□□□□ 0.75
CCM2-205ENST00000472223 DEFB115Q30KQ5 88 aa19.72■□□□□ 0.75
CCM2-205ENST00000472223 CLEC10AQ8IUN9 316 aa19.72■□□□□ 0.75
CCM2-205ENST00000472223 LRRC47Q8N1G4 583 aaKnown RBP19.72■□□□□ 0.75
CCM2-205ENST00000472223 CHMP4CQ96CF2 233 aa19.72■□□□□ 0.75
CCM2-205ENST00000472223 WNK4Q96J92 1243 aa19.72■□□□□ 0.75
CCM2-205ENST00000472223 KIAA1683Q9H0B3 1180 aa19.72■□□□□ 0.75
CCM2-205ENST00000472223 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.72■□□□□ 0.75
CCM2-205ENST00000472223 ECE1P42892 770 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 NOVP48745 357 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 GTF2A2P52657 109 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 MTMR2Q13614 643 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 ZYXQ15942 572 aaKnown RBP19.71■□□□□ 0.75
CCM2-205ENST00000472223 FASTKD5Q7L8L6 764 aaKnown RBP19.71■□□□□ 0.75
CCM2-205ENST00000472223 CCDC84Q86UT8 332 aaPredicted RBP19.71■□□□□ 0.75
CCM2-205ENST00000472223 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 NKX2-3Q8TAU0 364 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 ACER1Q8TDN7 264 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 LPAR1Q92633 364 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 MTMR7Q9Y216 660 aa19.71■□□□□ 0.75
CCM2-205ENST00000472223 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 F5H6K3 240 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 IRF6O14896 467 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 ZBTB43O43298 467 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 AK2P54819 239 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 KLRC3Q07444 240 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 SPRYD7Q5W111 196 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 SLFN13Q68D06 897 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 RCSD1Q6JBY9 416 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 GMCL1P1Q8NEA9 526 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 CTCFLQ8NI51 663 aaPredicted RBP19.7■□□□□ 0.74
CCM2-205ENST00000472223 NUP133Q8WUM0 1156 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 VCPKMTQ9H867 229 aa19.7■□□□□ 0.74
CCM2-205ENST00000472223 DDAH1O94760 285 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 CETPP11597 493 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 KIF5BP33176 963 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 APOBRQ0VD83 1088 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 GRM1Q13255 1194 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 SIAH1Q8IUQ4 282 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 ZNF654Q8IZM8 581 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 AGXT2Q9BYV1 514 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 LIMCH1Q9UPQ0 1083 aa19.69■□□□□ 0.74
CCM2-205ENST00000472223 CCDC196A0A1B0GTZ2 297 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 A0A1W2PRG0 241 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 SLC1A4P43007 532 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 HMGCS2P54868 508 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 C1QTNF8P60827 252 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 MKRN3Q13064 507 aaKnown RBP19.68■□□□□ 0.74
CCM2-205ENST00000472223 PABPC4Q13310 644 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCM2-205ENST00000472223 PPP2R5BQ15173 497 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 CCDC96Q2M329 555 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 GADL1Q6ZQY3 521 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 NOL8Q76FK4 1167 aaKnown RBP19.68■□□□□ 0.74
CCM2-205ENST00000472223 RASAL3Q86YV0 1011 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 DCAF4Q8WV16 495 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 ZNF274Q96GC6 653 aaPredicted RBP19.68■□□□□ 0.74
CCM2-205ENST00000472223 ZSCAN31Q96LW9 406 aaPredicted RBP19.68■□□□□ 0.74
CCM2-205ENST00000472223 GPHNQ9NQX3 736 aaPredicted RBP19.68■□□□□ 0.74
CCM2-205ENST00000472223 KCNH4Q9UQ05 1017 aa19.68■□□□□ 0.74
CCM2-205ENST00000472223 PHIPQ8WWQ0 1821 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 MANSC4A6NHS7 340 aaPredicted RBP19.67■□□□□ 0.74
CCM2-205ENST00000472223 GOLGA8BA8MQT2 603 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 SLC10A3P09131 477 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 PARP1P09874 1014 aaKnown RBP19.67■□□□□ 0.74
CCM2-205ENST00000472223 GNAQP50148 359 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 RCAN1P53805 252 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 INHBEP58166 350 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 IKQ13123 557 aaPredicted RBP19.67■□□□□ 0.74
CCM2-205ENST00000472223 TOB2Q14106 344 aaPredicted RBP19.67■□□□□ 0.74
CCM2-205ENST00000472223 SH3D19Q5HYK7 790 aa19.67■□□□□ 0.74
CCM2-205ENST00000472223 PROCA1Q8NCQ7 364 aaPredicted RBP19.67■□□□□ 0.74
CCM2-205ENST00000472223 A0A0G2JLL6 359 aaPredicted RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 WDR46O15213 610 aaKnown RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 DHX16O60231 1041 aaKnown RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 NDUFB10O96000 172 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 BMP3P12645 472 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 METAP2P50579 478 aaKnown RBP eCLIP19.66■□□□□ 0.74
CCM2-205ENST00000472223 SREBF2Q12772 1141 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 COL9A3Q14050 684 aaPredicted RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 GPATCH4Q5T3I0 446 aaKnown RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 OTUD7BQ6GQQ9 843 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 CPLX2Q6PUV4 134 aaKnown RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 APOA5Q6Q788 366 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 PRRT2Q7Z6L0 340 aaPredicted RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 MICU3Q86XE3 530 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 REM2Q8IYK8 340 aaPredicted RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 SPICE1Q8N0Z3 855 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 MAP3K14Q99558 947 aa19.66■□□□□ 0.74
CCM2-205ENST00000472223 SLKQ9H2G2 1235 aaPredicted RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 RBM28Q9NW13 759 aaKnown RBP19.66■□□□□ 0.74
CCM2-205ENST00000472223 GOLGA8AA7E2F4 631 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 EVCP57679 992 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 NOGQ13253 232 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 ASPRV1Q53RT3 343 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 FANCBQ8NB91 859 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 C12orf42Q96LP6 360 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms