RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 SLC9A7Q96T83 725 aa8.34□□□□□ -1.07
HDAC9-221ENST00000471887 H3BS24 57 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 ACRP10323 421 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 GIPRP48546 466 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 THAP5Q7Z6K1 395 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 TP53INP2Q8IXH6 220 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 DTWD2Q8NBA8 298 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 VWCEQ96DN2 955 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 SLC6A18Q96N87 628 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 ST14Q9Y5Y6 855 aa8.33□□□□□ -1.08
HDAC9-221ENST00000471887 PITPNM2Q9BZ72 1349 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 GP2P55259 537 aaKnown RBP8.32□□□□□ -1.08
HDAC9-221ENST00000471887 ZC3H6P61129 1189 aaKnown RBP8.32□□□□□ -1.08
HDAC9-221ENST00000471887 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 TMEM192Q8IY95 271 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 AGBL5Q8NDL9 886 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 SHDQ96IW2 340 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 DHRS1Q96LJ7 313 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 TRIT1Q9H3H1 467 aaKnown RBP8.32□□□□□ -1.08
HDAC9-221ENST00000471887 SEMA3GQ9NS98 782 aa8.32□□□□□ -1.08
HDAC9-221ENST00000471887 FAM86C2PA6NEL3 165 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 LRRN2O75325 713 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 SSBP05455 408 aaKnown RBP eCLIP8.31□□□□□ -1.08
HDAC9-221ENST00000471887 CD8BP10966 210 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 ARID5AQ03989 594 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-221ENST00000471887 ZNF574Q6ZN55 896 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-221ENST00000471887 NFXL1Q6ZNB6 911 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 SPRED2Q7Z698 418 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 SLC43A3Q8NBI5 491 aa8.31□□□□□ -1.08
HDAC9-221ENST00000471887 PAK6Q9NQU5 681 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-221ENST00000471887 ANGEL2Q5VTE6 544 aaKnown RBP8.3□□□□□ -1.08
HDAC9-221ENST00000471887 WFDC3Q8IUB2 231 aa8.3□□□□□ -1.08
HDAC9-221ENST00000471887 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
HDAC9-221ENST00000471887 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDAC9-221ENST00000471887 GPR62Q9BZJ7 368 aa8.3□□□□□ -1.08
HDAC9-221ENST00000471887 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
HDAC9-221ENST00000471887 ZSWIM5Q9P217 1185 aa8.3□□□□□ -1.08
HDAC9-221ENST00000471887 SUCOQ9UBS9 1254 aaKnown RBP8.3□□□□□ -1.08
HDAC9-221ENST00000471887 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
HDAC9-221ENST00000471887 RBAK-RBAKDNI3L0D1 243 aa8.29□□□□□ -1.08
HDAC9-221ENST00000471887 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 CD96P40200 585 aa8.29□□□□□ -1.08
HDAC9-221ENST00000471887 IKZF1Q13422 519 aa8.29□□□□□ -1.08
HDAC9-221ENST00000471887 UNC5AQ6ZN44 842 aa8.29□□□□□ -1.08
HDAC9-221ENST00000471887 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 C19orf47Q8N9M1 422 aaKnown RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 ZNF512BQ96KM6 892 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 MKRN2Q9H000 416 aaKnown RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 ASCC2Q9H1I8 757 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 DUSP15Q9H1R2 295 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-221ENST00000471887 ATP13A1Q9HD20 1204 aa8.29□□□□□ -1.08
HDAC9-221ENST00000471887 PLCL1Q15111 1095 aa8.28□□□□□ -1.08
HDAC9-221ENST00000471887 ZYXQ15942 572 aaKnown RBP8.28□□□□□ -1.08
HDAC9-221ENST00000471887 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
HDAC9-221ENST00000471887 FGRP09769 529 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 SRFP11831 508 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 PMS1P54277 932 aaKnown RBP8.27□□□□□ -1.09
HDAC9-221ENST00000471887 PPP2R5EQ16537 467 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 NBPF9Q3BBW0 867 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 BBS9Q3SYG4 887 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 NAALADL2Q58DX5 795 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 GMLQ99445 158 aa8.27□□□□□ -1.09
HDAC9-221ENST00000471887 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
HDAC9-221ENST00000471887 FUT4P22083 530 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 TPP2P29144 1249 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-221ENST00000471887 ZP2Q05996 745 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 NMIQ13287 307 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-221ENST00000471887 CLEC16AQ2KHT3 1053 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 TMPRSS7Q7RTY8 843 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 ABI1Q8IZP0 508 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 SMARCC1Q92922 1105 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-221ENST00000471887 LMCD1Q9NZU5 365 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 MRVI1Q9Y6F6 885 aa8.26□□□□□ -1.09
HDAC9-221ENST00000471887 A0A1W2PQH9 124 aa8.25□□□□□ -1.09
HDAC9-221ENST00000471887 CASP7P55210 303 aa8.25□□□□□ -1.09
HDAC9-221ENST00000471887 TSPYL5Q86VY4 417 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-221ENST00000471887 MCF2L2Q86YR7 1114 aa8.25□□□□□ -1.09
HDAC9-221ENST00000471887 FAM169BQ8N8A8 192 aa8.25□□□□□ -1.09
HDAC9-221ENST00000471887 ENOX1Q8TC92 643 aaKnown RBP8.25□□□□□ -1.09
HDAC9-221ENST00000471887 C8orf37Q96NL8 207 aa8.25□□□□□ -1.09
HDAC9-221ENST00000471887 PHAXQ9H814 394 aaKnown RBP8.25□□□□□ -1.09
HDAC9-221ENST00000471887 PCDHB12Q9Y5F1 795 aa8.25□□□□□ -1.09
HDAC9-221ENST00000471887 SHISA3A0PJX4 238 aa8.24□□□□□ -1.09
HDAC9-221ENST00000471887 C9IYK1 514 aa8.24□□□□□ -1.09
HDAC9-221ENST00000471887 AUHQ13825 339 aaKnown RBP8.24□□□□□ -1.09
HDAC9-221ENST00000471887 TDRD10Q5VZ19 366 aaKnown RBP8.24□□□□□ -1.09
HDAC9-221ENST00000471887 PI4K2BQ8TCG2 481 aa8.24□□□□□ -1.09
HDAC9-221ENST00000471887 CARS2Q9HA77 564 aaKnown RBP8.24□□□□□ -1.09
HDAC9-221ENST00000471887 DUSP13Q9UII6 198 aa8.24□□□□□ -1.09
HDAC9-221ENST00000471887 ZNF214Q9UL59 606 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-221ENST00000471887 LTBP3Q9NS15 1303 aa8.24□□□□□ -1.09
HDAC9-221ENST00000471887 WASH4PA8MWX3 477 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 SNW1Q13573 536 aaKnown RBP8.23□□□□□ -1.09
HDAC9-221ENST00000471887 GAB4Q2WGN9 574 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 TNNI3KQ59H18 835 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 SLC23A3Q6PIS1 610 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 TMC3Q7Z5M5 1100 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms