RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 TSKSQ9UJT2 592 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 TACC3Q9Y6A5 838 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 GPR25O00155 361 aa17.84■□□□□ 0.45
SNX13-205ENST00000471744 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
SNX13-205ENST00000471744 CYP21A2P08686 494 aa17.84■□□□□ 0.45
SNX13-205ENST00000471744 VCAM1P19320 739 aa17.84■□□□□ 0.45
SNX13-205ENST00000471744 RNF20Q5VTR2 975 aa17.84■□□□□ 0.45
SNX13-205ENST00000471744 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
SNX13-205ENST00000471744 CLEC10AQ8IUN9 316 aa17.84■□□□□ 0.45
SNX13-205ENST00000471744 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
SNX13-205ENST00000471744 NEDD4P46934 1319 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L15C9J2P7 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L13C9JLJ4 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L11C9JVI0 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L18D6R9N7 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L22D6RA61 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L17D6RBQ6 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L19D6RCP7 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L20D6RJB6 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
SNX13-205ENST00000471744 USP17L24Q0WX57 530 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 SMCR8Q8TEV9 937 aaPredicted RBP17.83■□□□□ 0.44
SNX13-205ENST00000471744 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
SNX13-205ENST00000471744 WDR46O15213 610 aaKnown RBP17.82■□□□□ 0.44
SNX13-205ENST00000471744 FKTNO75072 461 aa17.82■□□□□ 0.44
SNX13-205ENST00000471744 GCLCP48506 637 aaPredicted RBP17.82■□□□□ 0.44
SNX13-205ENST00000471744 DGKZQ13574 1117 aa17.82■□□□□ 0.44
SNX13-205ENST00000471744 TTC14Q96N46 770 aa17.82■□□□□ 0.44
SNX13-205ENST00000471744 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
SNX13-205ENST00000471744 STX8Q9UNK0 236 aa17.82■□□□□ 0.44
SNX13-205ENST00000471744 ADGRA2Q96PE1 1338 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 B4E1Z4 1266 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 KDM4AO75164 1064 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 CYP2C8P10632 490 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 NOVP48745 357 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
SNX13-205ENST00000471744 GMCL1P1Q8NEA9 526 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 R3HDMLQ9H3Y0 253 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 RPAP3Q9H6T3 665 aaPredicted RBP17.81■□□□□ 0.44
SNX13-205ENST00000471744 IL17RBQ9NRM6 502 aa17.81■□□□□ 0.44
SNX13-205ENST00000471744 PARP14Q460N5 1801 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 E7EWF7 191 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 SP3Q02447 781 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 ARHGEF6Q15052 776 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 DGKHQ86XP1 1220 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 ZNF296Q8WUU4 475 aaPredicted RBP17.8■□□□□ 0.44
SNX13-205ENST00000471744 ERO1AQ96HE7 468 aa17.8■□□□□ 0.44
SNX13-205ENST00000471744 MYPNQ86TC9 1320 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 F5H6K3 240 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 SLC27A2O14975 620 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 RAD21O60216 631 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 NMT2O60551 498 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 TOP1P11387 765 aaKnown RBP17.79■□□□□ 0.44
SNX13-205ENST00000471744 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
SNX13-205ENST00000471744 KLRC3Q07444 240 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 KIF22Q14807 665 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 SPICE1Q8N0Z3 855 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 UBAC1Q9BSL1 405 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 TANGO6Q9C0B7 1094 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 ZSWIM5Q9P217 1185 aa17.79■□□□□ 0.44
SNX13-205ENST00000471744 RLFQ13129 1914 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 NDUFB10O96000 172 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 BCRP11274 1271 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 HERVK_113P62684 666 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 COG2Q14746 738 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 SART3Q15020 963 aaKnown RBP17.78■□□□□ 0.44
SNX13-205ENST00000471744 FAM110CQ1W6H9 321 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 LBX2Q6XYB7 198 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 LRRC47Q8N1G4 583 aaKnown RBP17.78■□□□□ 0.44
SNX13-205ENST00000471744 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
SNX13-205ENST00000471744 P2RX7Q99572 595 aaKnown RBP17.78■□□□□ 0.44
SNX13-205ENST00000471744 CPA4Q9UI42 421 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 MGAMO43451 1857 aa17.78■□□□□ 0.44
SNX13-205ENST00000471744 KRT32Q14532 448 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 KIAA1755Q5JYT7 1200 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 SLFN13Q68D06 897 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 ANKS1AQ92625 1134 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 GMCL1Q96IK5 515 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 MTA3Q9BTC8 594 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
SNX13-205ENST00000471744 ERICH2A1L162 156 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 FLOT1O75955 427 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 FAM83BQ5T0W9 1011 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 STOX1Q6ZVD7 989 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 MB21D1Q8N884 522 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 RABGAP1Q9Y3P9 1069 aa17.76■□□□□ 0.43
SNX13-205ENST00000471744 TNKSO95271 1327 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 SPDYE16A6NNV3 312 aaPredicted RBP17.75■□□□□ 0.43
SNX13-205ENST00000471744 GNRH1P01148 92 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms