RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 CCL15Q16663 113 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
SSR4-207ENST00000471724 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 CYB5R4Q7L1T6 521 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 LPAR1Q92633 364 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 IL17RBQ9NRM6 502 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 IFIT3O14879 490 aaKnown RBP16.5■□□□□ 0.23
SSR4-207ENST00000471724 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
SSR4-207ENST00000471724 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
SSR4-207ENST00000471724 TM4SF4P48230 202 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
SSR4-207ENST00000471724 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
SSR4-207ENST00000471724 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 MKL1Q969V6 931 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 VCPKMTQ9H867 229 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
SSR4-207ENST00000471724 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
SSR4-207ENST00000471724 RBM25P49756 843 aaKnown RBP16.49■□□□□ 0.23
SSR4-207ENST00000471724 ANTXR2P58335 489 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.231e-9■■□□□ 14
SSR4-207ENST00000471724 WTAPQ15007 396 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
SSR4-207ENST00000471724 TMEM67Q5HYA8 995 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
SSR4-207ENST00000471724 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 GADL1Q6ZQY3 521 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 LRRC47Q8N1G4 583 aaKnown RBP16.49■□□□□ 0.23
SSR4-207ENST00000471724 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 KAT14Q9H8E8 782 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
SSR4-207ENST00000471724 RNF186Q9NXI6 227 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
SSR4-207ENST00000471724 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 SEC23AQ15436 765 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 TNS4Q8IZW8 715 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 ANKS1AQ92625 1134 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 SLC45A1Q9Y2W3 748 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
SSR4-207ENST00000471724 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
SSR4-207ENST00000471724 TRPA1O75762 1119 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 VCAM1P19320 739 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 FGD1P98174 961 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 CHST3Q7LGC8 479 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 ZSWIM6Q9HCJ5 1215 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 TSKSQ9UJT2 592 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 PNMA3Q9UL41 463 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 RLFQ13129 1914 aa16.47■□□□□ 0.23
SSR4-207ENST00000471724 SH2B2O14492 632 aaPredicted RBP16.46■□□□□ 0.23
SSR4-207ENST00000471724 RAD21O60216 631 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 MOGSQ13724 837 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 RUFY3Q7L099 469 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 PNMA1Q8ND90 353 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 TBC1D32Q96NH3 1257 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
SSR4-207ENST00000471724 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 F5H6K3 240 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 NDUFB10O96000 172 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 LIFRP42702 1097 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
SSR4-207ENST00000471724 KLRC3Q07444 240 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 IFNL1Q8IU54 200 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 IGDCC4Q8TDY8 1250 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 LY9Q9HBG7 655 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 MYH6P13533 1939 aa16.45■□□□□ 0.22
SSR4-207ENST00000471724 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
SSR4-207ENST00000471724 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 IGF2BP3O00425 579 aaKnown RBP eCLIP16.44■□□□□ 0.22
SSR4-207ENST00000471724 DDAH1O94760 285 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 SLC1A4P43007 532 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
SSR4-207ENST00000471724 DGKZQ13574 1117 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 SLFN13Q68D06 897 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 FBXL16Q8N461 479 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms