RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DOK7Q18PE1 504 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ANKRD42Q8N9B4 389 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ARPP19P56211 112 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MYO9BQ13459 2157 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SYNRGQ9UMZ2 1314 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PLCH2O75038 1416 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 BLVRAP53004 296 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MCUQ8NE86 351 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TTF2Q9UNY4 1162 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ELP1O95163 1332 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ZRANB2O95218 330 aaKnown RBP eCLIP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 EVCP57679 992 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ATP8B2P98198 1209 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 VWA3BQ502W6 1294 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 HS1BP3Q53T59 392 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 FAM95CA0A1B0GW59 222 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 HDXQ7Z353 690 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PDZD8Q8NEN9 1154 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 BLZF1Q9H2G9 400 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 METTL14Q9HCE5 456 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 UBN1Q9NPG3 1134 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RNASELQ05823 741 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CROCCQ5TZA2 2017 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NDUFAB1O14561 156 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 OTUD6AQ7L8S5 288 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 BRAPQ7Z569 592 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 XAB2Q9HCS7 855 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MTHFSDQ2M296 383 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TBC1D32Q96NH3 1257 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 LGSNQ5TDP6 509 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KIAA1841Q6NSI8 718 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TAOK1Q7L7X3 1001 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PEX26Q7Z412 305 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KIAA0825Q8IV33 1275 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 AFAP1L1Q8TED9 768 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DDX17Q92841 729 aaKnown RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 HDAC11Q96DB2 347 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SLC7A5P2Q9GIP4 190 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DISC1Q9NRI5 854 aa14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 FAM207AQ9NSI2 230 aaPredicted RBP14.59□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ARHGAP42A6NI28 874 aa14.58□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 JADE1Q6IE81 842 aa14.58□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ZMAT2Q96NC0 199 aaKnown RBP14.58□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 THRAP3Q9Y2W1 955 aaKnown RBP14.58□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 GPAA1O43292 621 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 DPP9Q86TI2 863 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 BAG5Q9UL15 447 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ADCY7P51828 1080 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MICAL1Q8TDZ2 1067 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TRIM56Q9BRZ2 755 aaKnown RBP14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 GBP1P32455 592 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MYL5Q02045 173 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 OTUD7BQ6GQQ9 843 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 DCPSQ96C86 337 aaKnown RBP14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 NR1H4Q96RI1 486 aaPredicted RBP14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LRRIQ4A6NIV6 560 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LIG4P49917 911 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LINS1Q8NG48 757 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PGBD1Q96JS3 809 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ZNF277Q9NRM2 450 aaPredicted RBP14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 A1BGP04217 495 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TRIM55Q9BYV6 548 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ANAPC5Q9UJX4 755 aa14.58□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PYGLP06737 847 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KCNJ14Q9UNX9 436 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PCDHB15Q9Y5E8 787 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KLHL30Q0D2K2 578 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ANKRD20A3Q5VUR7 823 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 DENND2CQ68D51 928 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TTBK2Q6IQ55 1244 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KRBA2Q6ZNG9 492 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 RSRC2Q7L4I2 434 aaKnown RBP14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 WDR48Q8TAF3 677 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 HOOK2Q96ED9 719 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TACO1Q9BSH4 297 aaKnown RBP14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 VPS54Q9P1Q0 977 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ADPGKQ9BRR6 497 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 USP40Q9NVE5 1235 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LRWD1Q9UFC0 647 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KCNH3Q9ULD8 1083 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 DEXIO95424 95 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LRRC23Q53EV4 343 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CEP128Q6ZU80 1094 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TAB2Q9NYJ8 693 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 BAG2O95816 211 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ECE1P42892 770 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PAK1Q13153 545 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 RAPH1Q70E73 1250 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms