RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 hCG_1642624A0A1W2PR95 340 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 UQCRHP07919 91 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 SRGNP10124 158 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 ALDH1B1P30837 517 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 TRAPPC10P48553 1259 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 MYL5Q02045 173 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 GRIK5Q16478 980 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 TBC1D16Q8TBP0 767 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 OSBPL5Q9H0X9 879 aaPredicted RBP21.29■■□□□ 1
COL20A1-205ENST00000471582 ZNF287Q9HBT7 754 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 IL17RBQ9NRM6 502 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 PCDHA5Q9Y5H7 936 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 GPR75-ASB3A0A0A6YYF3 556 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 PLCG2P16885 1265 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 GNAQP50148 359 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 POSTNQ15063 836 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 OLFM4Q6UX06 510 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 FOXP4Q8IVH2 680 aaPredicted RBP21.29■■□□□ 1
COL20A1-205ENST00000471582 SLF2Q8IX21 1173 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 TBC1D22AQ8WUA7 517 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 FAM163AQ96GL9 167 aaPredicted RBP21.29■■□□□ 1
COL20A1-205ENST00000471582 GPR101Q96P66 508 aaPredicted RBP21.29■■□□□ 1
COL20A1-205ENST00000471582 MKNK2Q9HBH9 465 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 SH3GLB2Q9NR46 395 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 ATP6V0A2Q9Y487 856 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
COL20A1-205ENST00000471582 C6orf229H3BNL8 230 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 POLR2DO15514 142 aaKnown RBP21.28■■□□□ 1
COL20A1-205ENST00000471582 SPECC1Q5M775 1068 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 TRIML1Q8N9V2 468 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 PNMA1Q8ND90 353 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 TGFBRAP1Q8WUH2 860 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 CCDC34Q96HJ3 373 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 CSRNP2Q9H175 543 aa21.28■■□□□ 1
COL20A1-205ENST00000471582 TMX4Q9H1E5 349 aaPredicted RBP21.28■■□□□ 1
COL20A1-205ENST00000471582 FAM205CA6NFA0 338 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 CALML3P27482 149 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 GRM4Q14833 912 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 EARS2Q5JPH6 523 aaKnown RBP21.27■■□□□ 1
COL20A1-205ENST00000471582 MYRIPQ8NFW9 859 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 DYNC1I1O14576 645 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 ACTN4O43707 911 aaKnown RBP21.27■■□□□ 1
COL20A1-205ENST00000471582 ATP2B1P20020 1258 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 SARSP49591 514 aaKnown RBP21.27■■□□□ 1
COL20A1-205ENST00000471582 TTC38Q5R3I4 469 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 DYNLL2Q96FJ2 89 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 XPO4Q9C0E2 1151 aaKnown RBP21.27■■□□□ 1
COL20A1-205ENST00000471582 HSD3B7Q9H2F3 369 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 POLLQ9UGP5 575 aa21.27■■□□□ 1
COL20A1-205ENST00000471582 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
COL20A1-205ENST00000471582 TSPY3P0CV98 308 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 TSPY8P0CW00 308 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 BTDP43251 543 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 ZNF444Q8N0Y2 327 aaPredicted RBP21.26■□□□□ 0.99
COL20A1-205ENST00000471582 FAM177A1Q8N128 213 aaPredicted RBP21.26■□□□□ 0.99
COL20A1-205ENST00000471582 MASTLQ96GX5 879 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 IFNKQ9P0W0 207 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 SERTAD1Q9UHV2 236 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 DACH1Q9UI36 760 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 GAKO14976 1311 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 FAM205AQ6ZU69 1335 aa21.26■□□□□ 0.99
COL20A1-205ENST00000471582 SMC2O95347 1197 aa21.25■□□□□ 0.99
COL20A1-205ENST00000471582 NLRP5P59047 1200 aa21.25■□□□□ 0.99
COL20A1-205ENST00000471582 SPATA20Q8TB22 786 aa21.25■□□□□ 0.99
COL20A1-205ENST00000471582 ATP2C1P98194 919 aaPredicted RBP21.25■□□□□ 0.99
COL20A1-205ENST00000471582 ISM2Q6H9L7 571 aa21.25■□□□□ 0.99
COL20A1-205ENST00000471582 FILIP1Q7Z7B0 1213 aa21.25■□□□□ 0.99
COL20A1-205ENST00000471582 MLKLQ8NB16 471 aa21.25■□□□□ 0.99
COL20A1-205ENST00000471582 FOXN1O15353 648 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 RASA1P20936 1047 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 GTF2F1P35269 517 aaKnown RBP eCLIP21.24■□□□□ 0.99
COL20A1-205ENST00000471582 FANCCQ00597 558 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 MAPKAPK5Q8IW41 473 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 CCDC150Q8NCX0 1101 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 SMARCE1Q969G3 411 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 MAN1B1Q9UKM7 699 aa21.24■□□□□ 0.99
COL20A1-205ENST00000471582 CBFA2T2O43439 604 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 BMP6P22004 513 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
COL20A1-205ENST00000471582 PLCD1P51178 756 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 CCZ1BP86790 482 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 CCZ1P86791 482 aaPredicted RBP21.23■□□□□ 0.99
COL20A1-205ENST00000471582 MORC3Q14149 939 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 SLC4A8Q2Y0W8 1093 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 MFSD14BQ5SR56 506 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 C16orf86Q6ZW13 317 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 TEX11Q8IYF3 940 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 LZTS2Q9BRK4 669 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 MAD2L2Q9UI95 211 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 SLFN14P0C7P3 912 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 SKILP12757 684 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 CT47A1Q5JQC4 288 aaPredicted RBP21.23■□□□□ 0.99
COL20A1-205ENST00000471582 KCND1Q9NSA2 647 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 FOCADQ5VW36 1801 aa21.23■□□□□ 0.99
COL20A1-205ENST00000471582 FLT1P17948 1338 aa21.22■□□□□ 0.99
COL20A1-205ENST00000471582 SNED1Q8TER0 1413 aa21.22■□□□□ 0.99
COL20A1-205ENST00000471582 GALNT17Q6IS24 598 aa21.22■□□□□ 0.99
COL20A1-205ENST00000471582 USP49Q70CQ1 688 aa21.22■□□□□ 0.99
COL20A1-205ENST00000471582 PYM1Q9BRP8 204 aaKnown RBP21.22■□□□□ 0.99
COL20A1-205ENST00000471582 SUGT1Q9Y2Z0 365 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms