RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-208ENST00000471322 SNCAIPQ9Y6H5 919 aa20.34■□□□□ 0.85
HSPG2-208ENST00000471322 FOCADQ5VW36 1801 aa20.34■□□□□ 0.85
HSPG2-208ENST00000471322 CYP2D7A0A087X1C5 515 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 CCDC196A0A1B0GTZ2 297 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 CYP2D6P10635 497 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 DEKP35659 375 aaKnown RBP20.33■□□□□ 0.84
HSPG2-208ENST00000471322 GJA5P36382 358 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 PLCD1P51178 756 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 SPRYD7Q5W111 196 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 CRACR2BQ8N4Y2 399 aaPredicted RBP20.33■□□□□ 0.84
HSPG2-208ENST00000471322 OPTNQ96CV9 577 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 OTUD5Q96G74 571 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 ZNF287Q9HBT7 754 aa20.33■□□□□ 0.84
HSPG2-208ENST00000471322 GOLGA8AA7E2F4 631 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 RANBP6O60518 1105 aaKnown RBP20.32■□□□□ 0.84
HSPG2-208ENST00000471322 DTNBO60941 627 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 POLR3DP05423 398 aaPredicted RBP20.32■□□□□ 0.84
HSPG2-208ENST00000471322 HLA-DOAP06340 250 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 STK11IPQ8N1F8 1099 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 WNK4Q96J92 1243 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
HSPG2-208ENST00000471322 DNAJC18Q9H819 358 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 ZNF112Q9UJU3 913 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 NID2Q14112 1375 aa20.32■□□□□ 0.84
HSPG2-208ENST00000471322 COL2A1P02458 1487 aaPredicted RBP20.32■□□□□ 0.84
HSPG2-208ENST00000471322 SMIM22K7EJ46 135 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 MAP2K2P36507 400 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 KRT85P78386 507 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 RRP1BQ14684 758 aaKnown RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 TRIM34Q9BYJ4 488 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 MYH1P12882 1939 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 MAP3K10Q02779 954 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 SEC23AQ15436 765 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 SHROOM1Q2M3G4 852 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 CCDC178Q5BJE1 867 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 CCDC84Q86UT8 332 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 MICU3Q86XE3 530 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-208ENST00000471322 SENP2Q9HC62 589 aa20.31■□□□□ 0.84
HSPG2-208ENST00000471322 TNKSO95271 1327 aa20.3■□□□□ 0.84
HSPG2-208ENST00000471322 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
HSPG2-208ENST00000471322 TBC1D12O60347 775 aa20.3■□□□□ 0.84
HSPG2-208ENST00000471322 FDPSP14324 419 aaKnown RBP20.3■□□□□ 0.84
HSPG2-208ENST00000471322 DNM1Q05193 864 aaKnown RBP20.3■□□□□ 0.84
HSPG2-208ENST00000471322 CHAMP1Q96JM3 812 aa20.3■□□□□ 0.84
HSPG2-208ENST00000471322 ZKSCAN3Q9BRR0 538 aa20.3■□□□□ 0.84
HSPG2-208ENST00000471322 CNPY2Q9Y2B0 182 aa20.3■□□□□ 0.84
HSPG2-208ENST00000471322 ROBO3Q96MS0 1386 aa20.29■□□□□ 0.84
HSPG2-208ENST00000471322 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
HSPG2-208ENST00000471322 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
HSPG2-208ENST00000471322 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
HSPG2-208ENST00000471322 FERMT3Q86UX7 667 aa20.29■□□□□ 0.84
HSPG2-208ENST00000471322 C8orf76Q96K31 380 aa20.29■□□□□ 0.84
HSPG2-208ENST00000471322 SCAND2PQ9GZW5 306 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-208ENST00000471322 HERC5Q9UII4 1024 aaKnown RBP20.29■□□□□ 0.84
HSPG2-208ENST00000471322 TSKSQ9UJT2 592 aa20.29■□□□□ 0.84
HSPG2-208ENST00000471322 BAZ2AQ9UIF9 1905 aaKnown RBP20.29■□□□□ 0.84
HSPG2-208ENST00000471322 NAV1Q8NEY1 1877 aa20.29■□□□□ 0.84
HSPG2-208ENST00000471322 UNCXA6NJT0 531 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 CALM1P0DP23 149 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 CALM2P0DP24 149 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 CALM3P0DP25 149 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 RESTQ13127 1097 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 RTN1Q16799 776 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 IFIT1BQ5T764 474 aaKnown RBP20.28■□□□□ 0.84
HSPG2-208ENST00000471322 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 CATIPQ7Z7H3 387 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 TTC6Q86TZ1 520 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 FOXP4Q8IVH2 680 aaPredicted RBP20.28■□□□□ 0.84
HSPG2-208ENST00000471322 WASF1Q92558 559 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 DYNLL2Q96FJ2 89 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 SERPINB13Q9UIV8 391 aa20.28■□□□□ 0.84
HSPG2-208ENST00000471322 ISY1Q9ULR0 285 aaKnown RBP20.28■□□□□ 0.84
HSPG2-208ENST00000471322 SPDYE5A6NIY4 337 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 PRDM1O75626 825 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 GDF11O95390 407 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 IFNAR1P17181 557 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 MAP2K1Q02750 393 aaPredicted RBP20.27■□□□□ 0.84
HSPG2-208ENST00000471322 ERO1BQ86YB8 467 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 SCYL3Q8IZE3 742 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 ZNF654Q8IZM8 581 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 ENAHQ8N8S7 591 aaPredicted RBP20.27■□□□□ 0.84
HSPG2-208ENST00000471322 MKNK2Q9HBH9 465 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 PICK1Q9NRD5 415 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 WBP1LQ9NX94 342 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 CFAP45Q9UL16 551 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 STK36Q9NRP7 1315 aa20.27■□□□□ 0.84
HSPG2-208ENST00000471322 IRF6O14896 467 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 CTNND1O60716 968 aaKnown RBP20.27■□□□□ 0.83
HSPG2-208ENST00000471322 ZBTB48P10074 688 aaPredicted RBP20.27■□□□□ 0.83
HSPG2-208ENST00000471322 CDC27P30260 824 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 UBE2HP62256 183 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 JAG1P78504 1218 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 NTRK3Q16288 839 aa20.27■□□□□ 0.83
HSPG2-208ENST00000471322 FANCBQ8NB91 859 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms