RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 CTGFP29279 349 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 HAND2P61296 217 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 HERVK_113P62684 666 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 KIF22Q14807 665 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 ARHGEF6Q15052 776 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 FAM110CQ1W6H9 321 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 FAM47AQ5JRC9 791 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 MKL1Q969V6 931 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 CEP95Q96GE4 821 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 ARHGAP39Q9C0H5 1083 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 MTMR4Q9NYA4 1195 aa18■□□□□ 0.47
ABCF3-208ENST00000471226 ZNF213O14771 459 aa17.99■□□□□ 0.47
ABCF3-208ENST00000471226 PCP11498 1178 aaKnown RBP17.99■□□□□ 0.47
ABCF3-208ENST00000471226 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
ABCF3-208ENST00000471226 AKNAD1Q5T1N1 836 aa17.99■□□□□ 0.47
ABCF3-208ENST00000471226 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
ABCF3-208ENST00000471226 STAG1Q8WVM7 1258 aa17.99■□□□□ 0.47
ABCF3-208ENST00000471226 RPAP3Q9H6T3 665 aaPredicted RBP17.99■□□□□ 0.47
ABCF3-208ENST00000471226 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
ABCF3-208ENST00000471226 GNRH1P01148 92 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 FBXO46Q6PJ61 603 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-208ENST00000471226 POTEEQ6S8J3 1075 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 GTF3C2Q8WUA4 911 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-208ENST00000471226 ABHD8Q96I13 439 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 GOPCQ9HD26 462 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 IL17RBQ9NRM6 502 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 CLIP2Q9UDT6 1046 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 PTPN22Q9Y2R2 807 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 A0A0G2JMZ2 1700 aa17.98■□□□□ 0.47
ABCF3-208ENST00000471226 TSPY2A6NKD2 308 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 WDR46O15213 610 aaKnown RBP17.97■□□□□ 0.47
ABCF3-208ENST00000471226 RANBP6O60518 1105 aaKnown RBP17.97■□□□□ 0.47
ABCF3-208ENST00000471226 TTLL1O95922 423 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 PSMC4P43686 418 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 NOVP48745 357 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 PTH1RQ03431 593 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 TRIM47Q96LD4 638 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-208ENST00000471226 RBPJLQ9UBG7 517 aa17.97■□□□□ 0.47
ABCF3-208ENST00000471226 COL11A1P12107 1806 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-208ENST00000471226 COG2Q14746 738 aa17.96■□□□□ 0.47
ABCF3-208ENST00000471226 IMMTQ16891 758 aaKnown RBP17.96■□□□□ 0.47
ABCF3-208ENST00000471226 SPICE1Q8N0Z3 855 aa17.96■□□□□ 0.47
ABCF3-208ENST00000471226 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
ABCF3-208ENST00000471226 TCP11L1Q9NUJ3 509 aa17.96■□□□□ 0.47
ABCF3-208ENST00000471226 SPDYE16A6NNV3 312 aaPredicted RBP17.95■□□□□ 0.46
ABCF3-208ENST00000471226 F5H6K3 240 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 NT5C2P49902 561 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 PRMT2P55345 433 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 FCGRTP55899 365 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 KLRC3Q07444 240 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
ABCF3-208ENST00000471226 PPP4R3BQ5MIZ7 849 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 ESYT1Q9BSJ8 1104 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 TOMM22Q9NS69 142 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 HOXC10Q9NYD6 342 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 RABGAP1Q9Y3P9 1069 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 NEDD4P46934 1319 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
ABCF3-208ENST00000471226 NMT2O60551 498 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 PEX10O60683 326 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 CNMDO75829 334 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
ABCF3-208ENST00000471226 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
ABCF3-208ENST00000471226 DSG3P32926 999 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 Q3C1V9 767 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 GMCL1P1Q8NEA9 526 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 GPRC5AQ8NFJ5 357 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 MAP4K1Q92918 833 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 SRRDQ9UH36 339 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 HPS5Q9UPZ3 1129 aa17.94■□□□□ 0.46
ABCF3-208ENST00000471226 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
ABCF3-208ENST00000471226 HTTP42858 3142 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 NDUFB10O96000 172 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 HOXD10P28358 340 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 ERVK-9P63128 1117 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 ERVK-24P63145 666 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 LRRC47Q8N1G4 583 aaKnown RBP17.93■□□□□ 0.46
ABCF3-208ENST00000471226 ESR2Q92731 530 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
ABCF3-208ENST00000471226 FLOT1O75955 427 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 CYP21A2P08686 494 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 PAGR1Q9BTK6 254 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 LSG1Q9H089 658 aaKnown RBP17.92■□□□□ 0.46
ABCF3-208ENST00000471226 BTBD7Q9P203 1132 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 ADAMTS5Q9UNA0 930 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
ABCF3-208ENST00000471226 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
ABCF3-208ENST00000471226 RAD21O60216 631 aa17.91■□□□□ 0.46
ABCF3-208ENST00000471226 CDC45O75419 566 aa17.91■□□□□ 0.46
ABCF3-208ENST00000471226 RCSD1Q6JBY9 416 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms