RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 IFIT1P09914 478 aaKnown RBP6.68□□□□□ -1.34
HDAC8-216ENST00000470998 UQCRFS1P1P0C7P4 283 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 TIMP2P16035 220 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 RPS6KB1P23443 525 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
HDAC8-216ENST00000470998 HIRAP54198 1017 aaPredicted RBP6.68□□□□□ -1.34
HDAC8-216ENST00000470998 AK2P54819 239 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 SCARF1Q14162 830 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 INTS6LQ5JSJ4 861 aaKnown RBP6.68□□□□□ -1.34
HDAC8-216ENST00000470998 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
HDAC8-216ENST00000470998 TTLL11Q8NHH1 800 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 DBNDD2Q9BQY9 259 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 LLPHQ9BRT6 129 aaKnown RBP6.68□□□□□ -1.34
HDAC8-216ENST00000470998 IL25Q9H293 177 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 DBNDD1Q9H9R9 158 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 SENP2Q9HC62 589 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 LEMD3Q9Y2U8 911 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 WDR19Q8NEZ3 1342 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 LRRC37AA6NMS7 1700 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 DUOX1Q9NRD9 1551 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 CA12O43570 354 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 LETM1O95202 739 aaPredicted RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 CELF2O95319 508 aaKnown RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 MAP4K4O95819 1239 aaPredicted RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 BMP1P13497 986 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 NT5C2P49902 561 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 HMGN5P82970 282 aaKnown RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 PTH1RQ03431 593 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 VAC14Q08AM6 782 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 PUM3Q15397 648 aaKnown RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ATP2B3Q16720 1220 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 TTC39AQ5SRH9 613 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 CST9Q5W186 159 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ZNF787Q6DD87 383 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 SAPCD2Q86UD0 394 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ZGPATQ8N5A5 531 aaKnown RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 TRPM4Q8TD43 1214 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 APPBP2Q92624 585 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 DCPSQ96C86 337 aaKnown RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ITPKCQ96DU7 683 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 CAPNS2Q96L46 248 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 NEK1Q96PY6 1258 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 DNAJC2Q99543 621 aaKnown RBP6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ANKRD2Q9GZV1 360 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 COA1Q9GZY4 146 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ZFAND3Q9H8U3 227 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ATP13A2Q9NQ11 1180 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 ZMYM6O95789 1325 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 MYO3BQ8WXR4 1341 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 LTBP1Q14766 1721 aa6.67□□□□□ -1.34
HDAC8-216ENST00000470998 USP17L3A6NCW0 530 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 USP17L4A6NCW7 530 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 TRAF5O00463 557 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 LCE2BO14633 110 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 RNF113AO15541 343 aaKnown RBP6.66□□□□□ -1.34
HDAC8-216ENST00000470998 STX6O43752 255 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 ZSCAN22P10073 491 aaPredicted RBP6.66□□□□□ -1.34
HDAC8-216ENST00000470998 ZNF280AP59817 542 aaPredicted RBP6.66□□□□□ -1.34
HDAC8-216ENST00000470998 SEMA3FQ13275 785 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 UBE3CQ15386 1083 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 KIF4BQ2VIQ3 1234 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 METTL24Q5JXM2 366 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 MCTP1Q6DN14 999 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 LDHAL6AQ6ZMR3 332 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 USP17L1Q7RTZ2 530 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 FAM184AQ8NB25 1140 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 KLHDC4Q8TBB5 520 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 LPIN2Q92539 896 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 NEUROD6Q96NK8 337 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 GPR101Q96P66 508 aaPredicted RBP6.66□□□□□ -1.34
HDAC8-216ENST00000470998 AGXT2Q9BYV1 514 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 GLIS2Q9BZE0 524 aaPredicted RBP6.66□□□□□ -1.34
HDAC8-216ENST00000470998 GRPEL1Q9HAV7 217 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 LMBRD1Q9NUN5 540 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 MINPP1Q9UNW1 487 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 RIPOR2Q9Y4F9 1068 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 DDX60Q8IY21 1712 aaKnown RBP6.66□□□□□ -1.34
HDAC8-216ENST00000470998 ELP1O95163 1332 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 PITPNM2Q9BZ72 1349 aa6.66□□□□□ -1.34
HDAC8-216ENST00000470998 LAMB2P55268 1798 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 GOLIM4O00461 696 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 DHX16O60231 1041 aaKnown RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 GPR37L1O60883 481 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 PDE8BO95263 885 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 F13A1P00488 732 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 HSPA8P11142 646 aaKnown RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 SLC5A1P13866 664 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 ITGA6P23229 1130 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 SOX11P35716 441 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 FKBP1BP68106 108 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 NOGQ13253 232 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 IRF5Q13568 498 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 IMMTQ16891 758 aaKnown RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 TBC1D10BQ4KMP7 808 aaPredicted RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 STRIP1Q5VSL9 837 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms