RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 A6NHS1 94 aa8.09□□□□□ -1.11
GPNMB-208ENST00000470994 EREGO14944 169 aa8.09□□□□□ -1.11
GPNMB-208ENST00000470994 CYP11A1P05108 521 aa8.09□□□□□ -1.11
GPNMB-208ENST00000470994 NFICP08651 508 aa8.09□□□□□ -1.11
GPNMB-208ENST00000470994 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-208ENST00000470994 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-208ENST00000470994 MISP3Q96FF7 219 aa8.09□□□□□ -1.11
GPNMB-208ENST00000470994 NRKQ7Z2Y5 1582 aa8.09□□□□□ -1.11
GPNMB-208ENST00000470994 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-208ENST00000470994 ST20-MTHFSA0A0A6YYL1 179 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 DBX1A6NMT0 343 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 FARP2O94887 1054 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-208ENST00000470994 FBLN1P23142 703 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 USP5P45974 858 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 ZNF648Q5T619 568 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-208ENST00000470994 DYMQ7RTS9 669 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 COG3Q96JB2 828 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 RAD18Q9NS91 495 aa8.08□□□□□ -1.12
GPNMB-208ENST00000470994 RGPD1P0DJD0 1748 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 ITSN1Q15811 1721 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 EIF1AXP47813 144 aaKnown RBP8.07□□□□□ -1.12
GPNMB-208ENST00000470994 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 BCL7CQ8WUZ0 217 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-208ENST00000470994 IP6K1Q92551 441 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 SEMA6CQ9H3T2 930 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
GPNMB-208ENST00000470994 PHRF1Q9P1Y6 1649 aaKnown RBP8.07□□□□□ -1.12
GPNMB-208ENST00000470994 MAOBP27338 520 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 CYP27C1Q4G0S4 372 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 SYT17Q9BSW7 474 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 NRSN2Q9GZP1 204 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 MTFR1LQ9H019 292 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 AP4E1Q9UPM8 1137 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 SLIT3O75094 1523 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 LRP5O75197 1615 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 SBNO2Q9Y2G9 1366 aa8.06□□□□□ -1.12
GPNMB-208ENST00000470994 SRCAPQ6ZRS2 3230 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 PCDH1Q08174 1060 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 AAMPQ13685 434 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 POU4F3Q15319 338 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 ATG4DQ86TL0 474 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-208ENST00000470994 CLEC4MQ9H2X3 399 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-208ENST00000470994 TFCP2L1Q9NZI6 479 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 KIAA1210Q9ULL0 1709 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 CRYBG1Q9Y4K1 1723 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 NINLQ9Y2I6 1382 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 LMO7Q8WWI1 1683 aa8.05□□□□□ -1.12
GPNMB-208ENST00000470994 EP400Q96L91 3159 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 MPSTP25325 297 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 ASPAP45381 313 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 RRS1Q15050 365 aaKnown RBP8.04□□□□□ -1.12
GPNMB-208ENST00000470994 GPR162Q16538 588 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 OGFOD3Q6PK18 319 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 KSR1Q8IVT5 923 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 ZCRB1Q8TBF4 217 aaKnown RBP8.04□□□□□ -1.12
GPNMB-208ENST00000470994 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
GPNMB-208ENST00000470994 SLC38A3Q99624 504 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 CORO1BQ9BR76 489 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 FAM105AQ9NUU6 356 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 A0A1W2PP64 1363 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 TOPAZ1Q8N9V7 1692 aa8.04□□□□□ -1.12
GPNMB-208ENST00000470994 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 BCL9O00512 1426 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 POLD1P28340 1107 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 HOXC9P31274 260 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 TMF1P82094 1093 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 ZNF827Q17R98 1081 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 FBLN7Q53RD9 439 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 USHBP1Q8N6Y0 703 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 RAPGEF4Q8WZA2 1011 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 TESK2Q96S53 571 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 POLR3GLQ9BT43 218 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 DAGLAQ9Y4D2 1042 aa8.03□□□□□ -1.12
GPNMB-208ENST00000470994 EDC4Q6P2E9 1401 aaKnown RBP8.03□□□□□ -1.12
GPNMB-208ENST00000470994 QRICH2Q9H0J4 1663 aa8.02□□□□□ -1.13
GPNMB-208ENST00000470994 PPM1GO15355 546 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-208ENST00000470994 ZNF124Q15973 351 aa8.02□□□□□ -1.13
GPNMB-208ENST00000470994 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-208ENST00000470994 ZNF574Q6ZN55 896 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-208ENST00000470994 FAM168AQ92567 244 aa8.02□□□□□ -1.13
GPNMB-208ENST00000470994 PBXIP1Q96AQ6 731 aa8.02□□□□□ -1.13
GPNMB-208ENST00000470994 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
GPNMB-208ENST00000470994 FOXD3Q9UJU5 478 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-208ENST00000470994 TNS1Q9HBL0 1735 aaKnown RBP8.02□□□□□ -1.13
GPNMB-208ENST00000470994 TNS2Q63HR2 1409 aa8.02□□□□□ -1.13
GPNMB-208ENST00000470994 A0A096LPE4 126 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 A0A1W2PPZ6 126 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 FYB1O15117 783 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 NBPF6Q5VWK0 638 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 TMEM40Q8WWA1 233 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 NBPF4Q96M43 638 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 LATS2Q9NRM7 1088 aa8.01□□□□□ -1.13
GPNMB-208ENST00000470994 CCNL1Q9UK58 526 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms