RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PDGFBP01127 241 aaPredicted RBP7.41□□□□□ -1.22
VARS-222ENST00000470953 ADRB1P08588 477 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 FAM47AQ5JRC9 791 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 ASIC4Q96FT7 647 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 TOX2Q96NM4 488 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 MRIQ9BWK5 157 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 TRIM35Q9UPQ4 493 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 SLC4A7Q9Y6M7 1214 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 NDUFB9Q9Y6M9 179 aa7.41□□□□□ -1.22
VARS-222ENST00000470953 A0A1W2PQ45 241 aaPredicted RBP7.4□□□□□ -1.22
VARS-222ENST00000470953 A0A1W2PQY0 241 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 ATP2A2P16615 1042 aaKnown RBP7.4□□□□□ -1.22
VARS-222ENST00000470953 NUBP1P53384 320 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 HMGCS2P54868 508 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 FOXO4P98177 505 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 DMWDQ09019 674 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 SPP2Q13103 211 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 GCKRQ14397 625 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 DIXDC1Q155Q3 683 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 KSR2Q6VAB6 950 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 FBXO33Q7Z6M2 555 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 EDC3Q96F86 508 aaKnown RBP7.4□□□□□ -1.22
VARS-222ENST00000470953 MBIPQ9NS73 344 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 LMCD1Q9NZU5 365 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 RBPJLQ9UBG7 517 aa7.4□□□□□ -1.22
VARS-222ENST00000470953 HELZ2Q9BYK8 2649 aaKnown RBP7.4□□□□□ -1.23
VARS-222ENST00000470953 USP9XQ93008 2570 aaPredicted RBP7.39□□□□□ -1.23
VARS-222ENST00000470953 FAM196BA6NMK8 535 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 ZBBXA8MT70 800 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 APAF1O14727 1248 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 SLC4A2P04920 1241 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 MAPK4P31152 587 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 CYP2C18P33260 490 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 ATXN1P54253 815 aaKnown RBP7.39□□□□□ -1.23
VARS-222ENST00000470953 MAP3K10Q02779 954 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 SIGLEC14Q08ET2 396 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 IFIT5Q13325 482 aaKnown RBP7.39□□□□□ -1.23
VARS-222ENST00000470953 NBPF20Q3BBV1 942 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 HHIPL2Q6UWX4 724 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 LDHAL6AQ6ZMR3 332 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 PLEKHH3Q7Z736 793 aa7.39□□□□□ -1.23
VARS-222ENST00000470953 PROCA1Q8NCQ7 364 aaPredicted RBP7.39□□□□□ -1.23
VARS-222ENST00000470953 PUS3Q9BZE2 481 aaKnown RBP7.39□□□□□ -1.23
VARS-222ENST00000470953 SPINK5Q9NQ38 1064 aaPredicted RBP7.39□□□□□ -1.23
VARS-222ENST00000470953 DOCK1Q14185 1865 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 DDTLA6NHG4 134 aaPredicted RBP7.38□□□□□ -1.23
VARS-222ENST00000470953 CTNND1O60716 968 aaKnown RBP7.38□□□□□ -1.23
VARS-222ENST00000470953 DDX58O95786 925 aaKnown RBP7.38□□□□□ -1.23
VARS-222ENST00000470953 PRKCSHP14314 528 aaPredicted RBP7.38□□□□□ -1.23
VARS-222ENST00000470953 ATP2B2Q01814 1243 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 RRP1BQ14684 758 aaKnown RBP7.38□□□□□ -1.23
VARS-222ENST00000470953 G2E3Q7L622 706 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 C8orf58Q8NAV2 365 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 GPRC5AQ8NFJ5 357 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 NPLOC4Q8TAT6 608 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 FAM50BQ9Y247 325 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 LRRFIP2Q9Y608 721 aaKnown RBP7.38□□□□□ -1.23
VARS-222ENST00000470953 COL4A3Q01955 1670 aa7.38□□□□□ -1.23
VARS-222ENST00000470953 UMODL1Q5DID0 1318 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 SEPT4O43236 478 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 IGHA2P01877 340 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 RGS3P49796 1198 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 HERVK_113P62684 666 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 GNAI1P63096 354 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 UBE4AQ14139 1066 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 PRAMEF19Q5SWL8 479 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 CRIPAKQ8N1N5 446 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 TMEM105Q8N8V8 129 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 ZNF280CQ8ND82 737 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 KCNG4Q8TDN1 519 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 TBC1D22AQ8WUA7 517 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 VWCEQ96DN2 955 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 POP1Q99575 1024 aaKnown RBP7.37□□□□□ -1.23
VARS-222ENST00000470953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.37□□□□□ -1.23
VARS-222ENST00000470953 DDX4Q9NQI0 724 aaKnown RBP7.37□□□□□ -1.23
VARS-222ENST00000470953 CNNM1Q9NRU3 951 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 USP40Q9NVE5 1235 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 IFT57Q9NWB7 429 aa7.37□□□□□ -1.23
VARS-222ENST00000470953 DOCK2Q92608 1830 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 FRAT2O75474 233 aaPredicted RBP7.36□□□□□ -1.23
VARS-222ENST00000470953 PGK1P00558 417 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 ERVK-24P63145 666 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 NEXNQ0ZGT2 675 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 SMAD2Q15796 467 aaKnown RBP7.36□□□□□ -1.23
VARS-222ENST00000470953 LMBR1LQ6UX01 489 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 EP400NLQ6ZTU2 488 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 CCAR1Q8IX12 1150 aaKnown RBP7.36□□□□□ -1.23
VARS-222ENST00000470953 FAM9BQ8IZU0 186 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 DCLK2Q8N568 766 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 TSPYL6Q8N831 410 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 HNRNPABQ99729 332 aaKnown RBP7.36□□□□□ -1.23
VARS-222ENST00000470953 HINFPQ9BQA5 517 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 PAGR1Q9BTK6 254 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 STARD7Q9NQZ5 370 aa7.36□□□□□ -1.23
VARS-222ENST00000470953 DAXXQ9UER7 740 aaPredicted RBP7.36□□□□□ -1.23
VARS-222ENST00000470953 OTOGLQ3ZCN5 2332 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms