RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 USP17L10C9JJH3 530 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 TIMM10P62072 90 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 Q7L0L9 218 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
XRN1-208ENST00000470537 SSH1Q8WYL5 1049 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 TRIB2Q92519 343 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 RFX7Q2KHR2 1363 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 PTPRFP10586 1907 aa10.88□□□□□ -0.67
XRN1-208ENST00000470537 COL2A1P02458 1487 aaPredicted RBP10.87□□□□□ -0.67
XRN1-208ENST00000470537 A0A1B0GUL7 405 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 RHBDL3P58872 404 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 HERVK_113P62684 666 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 MFSD14CQ5VZR4 134 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
XRN1-208ENST00000470537 XAGE2Q96GT9 111 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 NEUROD6Q96NK8 337 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 RAI14Q9P0K7 980 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 LRP2BPQ9P2M1 347 aa10.87□□□□□ -0.67
XRN1-208ENST00000470537 DNAH12Q6ZR08 3092 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 LAMA2P24043 3122 aaKnown RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 CT47B1P0C2W7 299 aaPredicted RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 COL6A1P12109 1028 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 CACNB2Q08289 660 aaPredicted RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 MTMR2Q13614 643 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 ZNF697Q5TEC3 545 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 PLEKHH3Q7Z736 793 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 CCDC84Q86UT8 332 aaPredicted RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 TEX11Q8IYF3 940 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 SPATA5Q8NB90 893 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 EDC3Q96F86 508 aaKnown RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 APBA2Q99767 749 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 API5Q9BZZ5 524 aaKnown RBP10.86□□□□□ -0.67
XRN1-208ENST00000470537 SMC4Q9NTJ3 1288 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 IVNS1ABPQ9Y6Y0 642 aa10.86□□□□□ -0.67
XRN1-208ENST00000470537 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 HLA-DOAP06340 250 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 GNAI3P08754 354 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 UQCRFS1P1P0C7P4 283 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 ADORA1P30542 326 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 ERVK-24P63145 666 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
XRN1-208ENST00000470537 TRIM32Q13049 653 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 USP17L2Q6R6M4 530 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 CERS3Q8IU89 383 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 ARRDC4Q8NCT1 418 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
XRN1-208ENST00000470537 NSUN4Q96CB9 384 aaKnown RBP10.85□□□□□ -0.67
XRN1-208ENST00000470537 SENP6Q9GZR1 1112 aaPredicted RBP10.85□□□□□ -0.67
XRN1-208ENST00000470537 RABGAP1Q9Y3P9 1069 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 PHIPQ8WWQ0 1821 aa10.85□□□□□ -0.67
XRN1-208ENST00000470537 PFASO15067 1338 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 SRGAP3O43295 1099 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
XRN1-208ENST00000470537 ATP2B2Q01814 1243 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 MAP2K5Q13163 448 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 NAA16Q6N069 864 aaPredicted RBP10.84□□□□□ -0.67
XRN1-208ENST00000470537 BLOC1S3Q6QNY0 202 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 LPAR1Q92633 364 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 HMG20BQ9P0W2 317 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.84□□□□□ -0.67
XRN1-208ENST00000470537 RBPJLQ9UBG7 517 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 ALPK3Q96L96 1907 aa10.84□□□□□ -0.67
XRN1-208ENST00000470537 DDX60LQ5H9U9 1706 aaKnown RBP10.84□□□□□ -0.67
XRN1-208ENST00000470537 USP17L15C9J2P7 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L13C9JLJ4 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L11C9JVI0 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L18D6R9N7 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L22D6RA61 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L17D6RBQ6 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L19D6RCP7 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L20D6RJB6 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 DNM1LO00429 736 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 DNAJB2P25686 324 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP14P54578 494 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP17L24Q0WX57 530 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 G3BP1Q13283 466 aaKnown RBP eCLIP10.83□□□□□ -0.68
XRN1-208ENST00000470537 LRRC26Q2I0M4 334 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 MORN1Q5T089 497 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 METTL16Q86W50 562 aaKnown RBP10.83□□□□□ -0.68
XRN1-208ENST00000470537 USP6NLQ92738 828 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 PAGR1Q9BTK6 254 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 SLC5A4Q9NY91 659 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 PA2G4Q9UQ80 394 aaKnown RBP10.83□□□□□ -0.68
XRN1-208ENST00000470537 ZNF521Q96K83 1311 aa10.83□□□□□ -0.68
XRN1-208ENST00000470537 LOC285556D6RIA3 1793 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 SLC15A5A6NIM6 579 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 STRNO43815 780 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 SLURP2P0DP57 97 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
XRN1-208ENST00000470537 CNGA1P29973 690 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 CCND3P30281 292 aaPredicted RBP10.82□□□□□ -0.68
XRN1-208ENST00000470537 TFCP2Q12800 502 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 CCDC158Q5M9N0 1113 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms