RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CTAGE1Q96RT6 745 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 IQSEC3Q9UPP2 1182 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 THRAP3Q9Y2W1 955 aaKnown RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 AHDC1Q5TGY3 1603 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 PNMA6AP0CW24 399 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-209ENST00000470026 GNG11P61952 73 aa15.52■□□□□ 0.08
BRCA1-209ENST00000470026 TTC38Q5R3I4 469 aa15.52■□□□□ 0.08
BRCA1-209ENST00000470026 FBXO33Q7Z6M2 555 aa15.52■□□□□ 0.08
BRCA1-209ENST00000470026 FAM84BQ96KN1 310 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-209ENST00000470026 BRMS1Q9HCU9 246 aa15.52■□□□□ 0.08
BRCA1-209ENST00000470026 ARGLU1Q9NWB6 273 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-209ENST00000470026 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
BRCA1-209ENST00000470026 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.07
BRCA1-209ENST00000470026 LRRC10BA6NIK2 292 aa15.52■□□□□ 0.07
BRCA1-209ENST00000470026 RGL2O15211 777 aa15.52■□□□□ 0.07
BRCA1-209ENST00000470026 MINPP1Q9UNW1 487 aa15.52■□□□□ 0.07
BRCA1-209ENST00000470026 XDHP47989 1333 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 SPATA31A1Q5TZJ5 1347 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 KIAA1551Q9HCM1 1747 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 AFMP43652 599 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 CAVIN4Q5BKX8 364 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 NOM1Q5C9Z4 860 aaKnown RBP15.51■□□□□ 0.07
BRCA1-209ENST00000470026 C3orf67Q6ZVT6 689 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 SRBD1Q8N5C6 995 aaKnown RBP15.51■□□□□ 0.07
BRCA1-209ENST00000470026 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
BRCA1-209ENST00000470026 MRPL44Q9H9J2 332 aaKnown RBP15.51■□□□□ 0.07
BRCA1-209ENST00000470026 ADGRG1Q9Y653 693 aa15.51■□□□□ 0.07
BRCA1-209ENST00000470026 WTIPA6NIX2 430 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-209ENST00000470026 CCDC175P0C221 793 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 TAF1P21675 1872 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 PLA2G4AP47712 749 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 RBL2Q08999 1139 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 SLC10A5Q5PT55 438 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 GPR161Q8N6U8 529 aaKnown RBP15.5■□□□□ 0.07
BRCA1-209ENST00000470026 NSUN4Q96CB9 384 aaKnown RBP15.5■□□□□ 0.07
BRCA1-209ENST00000470026 CCDC51Q96ER9 411 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 UBXN6Q9BZV1 441 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 LIMA1Q9UHB6 759 aaKnown RBP15.5■□□□□ 0.07
BRCA1-209ENST00000470026 MAST2Q6P0Q8 1798 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 hCG_1642624A0A1W2PR95 340 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 USP17L12C9JPN9 530 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 USP17L21D6R901 530 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 IGSF3O75054 1194 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 PTGDRQ13258 359 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 ZNF174Q15697 407 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 DDB1Q16531 1140 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 SBK1Q52WX2 424 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 TMCO3Q6UWJ1 677 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 RAD9BQ6WBX8 426 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 IGSF22Q8N9C0 903 aa15.5■□□□□ 0.07
BRCA1-209ENST00000470026 MARCH10Q8NA82 808 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-209ENST00000470026 SOWAHDA6NJG2 315 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 MFAP3LO75121 409 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 SCG2P13521 617 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 CASP1P29466 404 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 PPP2R3AQ06190 1150 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 MTF1Q14872 753 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-209ENST00000470026 RASGRP2Q7LDG7 609 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 IQUBQ8NA54 791 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 STX17P56962 302 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 IL17AQ16552 155 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 RABGGTAQ92696 567 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 MTRQ99707 1265 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 DESI2Q9BSY9 194 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 DCP1AQ9NPI6 582 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-209ENST00000470026 ATP8A2Q9NTI2 1148 aa15.49■□□□□ 0.07
BRCA1-209ENST00000470026 MYH13Q9UKX3 1938 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 GTPBP6O43824 516 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-209ENST00000470026 NT5C2P49902 561 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 ARL6IP4Q66PJ3 421 aaKnown RBP15.48■□□□□ 0.07
BRCA1-209ENST00000470026 KLHL10Q6JEL2 608 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 PPFIBP1Q86W92 1011 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 FAM177A1Q8N128 213 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-209ENST00000470026 C4orf32Q8N8J7 132 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 CTCFLQ8NI51 663 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-209ENST00000470026 RWDD2AQ9UIY3 292 aa15.48■□□□□ 0.07
BRCA1-209ENST00000470026 GYPCP04921 128 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 ZNF771Q7L3S4 317 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-209ENST00000470026 CNGA4Q8IV77 575 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 ACSBG1Q96GR2 724 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 ST7Q9NRC1 585 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 MECOMQ03112 1051 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 TUBB2AQ13885 445 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 RCSD1Q6JBY9 416 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 CC2D1AQ6P1N0 951 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-209ENST00000470026 SMYD4Q8IYR2 804 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-209ENST00000470026 SMARCC1Q92922 1105 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-209ENST00000470026 TUBB2BQ9BVA1 445 aa15.47■□□□□ 0.07
BRCA1-209ENST00000470026 ARPP21Q9UBL0 812 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-209ENST00000470026 ADAMTS2O95450 1211 aa15.46■□□□□ 0.07
BRCA1-209ENST00000470026 EVX2Q03828 476 aa15.46■□□□□ 0.07
BRCA1-209ENST00000470026 SPAG1Q07617 926 aa15.46■□□□□ 0.07
BRCA1-209ENST00000470026 KARSQ15046 597 aaKnown RBP15.46■□□□□ 0.07
BRCA1-209ENST00000470026 KRT31Q15323 416 aa15.46■□□□□ 0.07
BRCA1-209ENST00000470026 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms