RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 KDM5DQ9BY66 1539 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 TUT1Q9H6E5 874 aaKnown RBP7.65□□□□□ -1.18
VPS8-219ENST00000469479 SEMA3GQ9NS98 782 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 C19orf73Q9NVV2 129 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 CACNA2D2Q9NY47 1150 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 IQGAP1P46940 1657 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 SYCP2Q9BX26 1530 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 LRRC9Q6ZRR7 1453 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 MIA2Q96PC5 1412 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 FAM155AB1AL88 458 aaPredicted RBP7.64□□□□□ -1.19
VPS8-219ENST00000469479 ARHGAP4P98171 946 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 NIF3L1Q9GZT8 377 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 ATP13A1Q9HD20 1204 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 CD320Q9NPF0 282 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 DCP1AQ9NPI6 582 aaPredicted RBP7.64□□□□□ -1.19
VPS8-219ENST00000469479 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
VPS8-219ENST00000469479 ADGBQ8N7X0 1667 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 TCAF2A6NFQ2 919 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 MED14OSP0DP75 135 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 NTF4P34130 210 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 B4GALNT3Q6L9W6 998 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 ATG14Q6ZNE5 492 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 C22orf34Q6ZV56 151 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 HSPA12BQ96MM6 686 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 EPB41L4BQ9H329 900 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 CBX8Q9HC52 389 aa7.63□□□□□ -1.19
VPS8-219ENST00000469479 RTEL1-TNFRSF6BF6WH68 1400 aa7.62□□□□□ -1.19
VPS8-219ENST00000469479 RAC2P15153 192 aa7.62□□□□□ -1.19
VPS8-219ENST00000469479 RING1Q06587 406 aa7.62□□□□□ -1.19
VPS8-219ENST00000469479 DBX2Q6ZNG2 339 aa7.62□□□□□ -1.19
VPS8-219ENST00000469479 TMC1Q8TDI8 760 aa7.62□□□□□ -1.19
VPS8-219ENST00000469479 DHX29Q7Z478 1369 aaKnown RBP7.61□□□□□ -1.19
VPS8-219ENST00000469479 WASHC2CQ9Y4E1 1318 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 GPR182O15218 404 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 LRIG2O94898 1065 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 GLDCP23378 1020 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 ZBTB37Q5TC79 503 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 ZNF772Q68DY9 489 aaPredicted RBP7.61□□□□□ -1.19
VPS8-219ENST00000469479 RELTQ969Z4 430 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 DMRTB1Q96MA1 342 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 ALPK1Q96QP1 1244 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 AKAP2Q9Y2D5 859 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 SAMM50Q9Y512 469 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 CSADQ9Y600 493 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 ARHGAP35Q9NRY4 1499 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 CASKIN1Q8WXD9 1431 aa7.61□□□□□ -1.19
VPS8-219ENST00000469479 JCADQ9P266 1359 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 TRIM37O94972 964 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 IGHA2P01877 340 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 HNRNPMP52272 730 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS8-219ENST00000469479 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 CDKAL1Q5VV42 579 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 SCARA3Q6AZY7 606 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 ARMCX6Q7L4S7 300 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 THAP5Q7Z6K1 395 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 C12orf40Q86WS4 652 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 MFSD4AQ8N468 514 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 ABHD4Q8TB40 342 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 ALKBH8Q96BT7 664 aaKnown RBP7.6□□□□□ -1.19
VPS8-219ENST00000469479 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 BCO2Q9BYV7 579 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 CFDP1Q9UEE9 299 aaPredicted RBP7.6□□□□□ -1.19
VPS8-219ENST00000469479 CDC42BPAQ5VT25 1732 aa7.6□□□□□ -1.19
VPS8-219ENST00000469479 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
VPS8-219ENST00000469479 SPATA31A6Q5VVP1 1343 aa7.59□□□□□ -1.19
VPS8-219ENST00000469479 GPATCH8Q9UKJ3 1502 aaKnown RBP7.59□□□□□ -1.19
VPS8-219ENST00000469479 DCDC2CA8MYV0 355 aa7.59□□□□□ -1.19
VPS8-219ENST00000469479 UBE3DQ7Z6J8 389 aa7.59□□□□□ -1.19
VPS8-219ENST00000469479 ZNF507Q8TCN5 953 aa7.59□□□□□ -1.19
VPS8-219ENST00000469479 SMG5Q9UPR3 1016 aaKnown RBP7.59□□□□□ -1.19
VPS8-219ENST00000469479 SCAF11Q99590 1463 aaKnown RBP7.59□□□□□ -1.19
VPS8-219ENST00000469479 CCNB3Q8WWL7 1395 aa7.59□□□□□ -1.2
VPS8-219ENST00000469479 ETV2O00321 342 aaPredicted RBP7.58□□□□□ -1.2
VPS8-219ENST00000469479 HOXA5P20719 270 aa7.58□□□□□ -1.2
VPS8-219ENST00000469479 KCNN1Q92952 543 aa7.58□□□□□ -1.2
VPS8-219ENST00000469479 C20orf173Q96LM9 149 aa7.58□□□□□ -1.2
VPS8-219ENST00000469479 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
VPS8-219ENST00000469479 EID1Q9Y6B2 187 aa7.58□□□□□ -1.2
VPS8-219ENST00000469479 FYCO1Q9BQS8 1478 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 H3BS24 57 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 KIF3BO15066 747 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 NUAK1O60285 661 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 SRFP11831 508 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 SERPINB4P48594 390 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 NECAB3Q96P71 396 aaPredicted RBP7.57□□□□□ -1.2
VPS8-219ENST00000469479 ST14Q9Y5Y6 855 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 FGD6Q6ZV73 1430 aa7.57□□□□□ -1.2
VPS8-219ENST00000469479 PRR33A8MZF0 331 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 SLITRK5O94991 958 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 BMP6P22004 513 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 LRRC14Q15048 493 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 MPRIPQ6WCQ1 1025 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 CEP44Q9C0F1 390 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 CAPN6Q9Y6Q1 641 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 ZC3H13Q5T200 1668 aaKnown RBP7.56□□□□□ -1.2
VPS8-219ENST00000469479 ABCC3O15438 1527 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 STRCP1A6NGW2 1772 aa7.56□□□□□ -1.2
VPS8-219ENST00000469479 SETD1AO15047 1707 aaKnown RBP7.55□□□□□ -1.2
VPS8-219ENST00000469479 CARNS1A5YM72 827 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms