RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 GADL1Q6ZQY3 521 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 EVI5LQ96CN4 794 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 EFCC1Q9HA90 598 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 CPA4Q9UI42 421 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 M0R2C6 588 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 GNRH1P01148 92 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 GNAT2P19087 354 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 CTGFP29279 349 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 MTMR2Q13614 643 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 ARHGEF6Q15052 776 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 SLC44A5Q8NCS7 719 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 DYNLL2Q96FJ2 89 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 C12orf42Q96LP6 360 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 SEC62Q99442 399 aaKnown RBP13.37□□□□□ -0.27
COL4A6-205ENST00000468338 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 MYH8P13535 1937 aa13.37□□□□□ -0.27
COL4A6-205ENST00000468338 PATL2C9JE40 543 aaKnown RBP13.36□□□□□ -0.27
COL4A6-205ENST00000468338 CDK8P49336 464 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 RGS19P49795 217 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 CCDC17Q96LX7 622 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 EPB41L4AQ9HCS5 686 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-205ENST00000468338 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 CABP5Q9NP86 173 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-205ENST00000468338 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
COL4A6-205ENST00000468338 ROBO3Q96MS0 1386 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
COL4A6-205ENST00000468338 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 FOXP2O15409 715 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-205ENST00000468338 PABPC4Q13310 644 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL4A6-205ENST00000468338 SEPT2Q15019 361 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 TMEM179Q6ZVK1 233 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 ACER1Q8TDN7 264 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 PTCD2Q8WV60 388 aaKnown RBP13.35□□□□□ -0.27
COL4A6-205ENST00000468338 ASCC2Q9H1I8 757 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-205ENST00000468338 MGAMO43451 1857 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 HTTP42858 3142 aa13.35□□□□□ -0.27
COL4A6-205ENST00000468338 GCLCP48506 637 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-205ENST00000468338 KIF22Q14807 665 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 SIAH1Q8IUQ4 282 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 AMOTL1Q8IY63 956 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 TRIM47Q96LD4 638 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 TMOD4Q9NZQ9 345 aa13.34□□□□□ -0.27
COL4A6-205ENST00000468338 GREB1LQ9C091 1923 aaPredicted RBP13.33□□□□□ -0.28
COL4A6-205ENST00000468338 A0A1W2PRG0 241 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 AKR1B1P15121 316 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 PSMC4P43686 418 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 USP14P54578 494 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 PRMT2P55345 433 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 SMCR8Q8TEV9 937 aaPredicted RBP13.33□□□□□ -0.28
COL4A6-205ENST00000468338 ARMC5Q96C12 935 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 DCBLD2Q96PD2 775 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 EPAS1Q99814 870 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL4A6-205ENST00000468338 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
COL4A6-205ENST00000468338 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
COL4A6-205ENST00000468338 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
COL4A6-205ENST00000468338 P2RX7Q99572 595 aaKnown RBP13.32□□□□□ -0.28
COL4A6-205ENST00000468338 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
COL4A6-205ENST00000468338 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
COL4A6-205ENST00000468338 PTCH2Q9Y6C5 1203 aa13.32□□□□□ -0.28
COL4A6-205ENST00000468338 RASA1P20936 1047 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 ALX1Q15699 326 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 CATSPERGQ6ZRH7 1159 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 FEZ1Q99689 392 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 COLQQ9Y215 455 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-205ENST00000468338 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
COL4A6-205ENST00000468338 A0A0D9SFI3 127 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
COL4A6-205ENST00000468338 APPP05067 770 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 VCAM1P19320 739 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 HOXD10P28358 340 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 TDO2P48775 406 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 FCGRTP55899 365 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms