RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 RGS2P41220 211 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 FXR1P51114 621 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 ICA1Q05084 483 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 MAP2K5Q13163 448 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 ZSCAN25Q6NSZ9 544 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 CCAR1Q8IX12 1150 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 HTATIP2Q9BUP3 242 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 TMX2Q9Y320 296 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 LAMA3Q16787 3333 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 M0R2C6 588 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 PTPREP23469 700 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 COG2Q14746 738 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 WDR78Q5VTH9 848 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 STK11IPQ8N1F8 1099 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 PI4K2BQ8TCG2 481 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 APBA2Q99767 749 aa17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 MOV10L1Q9BXT6 1211 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
ATPAF2-204ENST00000467560 EEF2P13639 858 aaKnown RBP17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 CCNA1P78396 465 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 GRB14Q14449 540 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 LHX8Q68G74 356 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 NPLOC4Q8TAT6 608 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 PRO3102Q9H379 93 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 PCDH10Q9P2E7 1040 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 OGDHLQ9ULD0 1010 aa17.74■□□□□ 0.43
ATPAF2-204ENST00000467560 ALPK3Q96L96 1907 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 SLC15A5A6NIM6 579 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 IGHA2P01877 340 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 DSG3P32926 999 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 NECAB2Q7Z6G3 386 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 APPBP2Q92624 585 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 ATG4CQ96DT6 458 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 SEC62Q99442 399 aaKnown RBP17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 CWC22Q9HCG8 908 aaKnown RBP17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 FBXO28Q9NVF7 368 aa17.73■□□□□ 0.43
ATPAF2-204ENST00000467560 A0A0G2JMZ2 1700 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 GPAA1O43292 621 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 RASA1P20936 1047 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 ANKLE1Q8NAG6 615 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 LPAR1Q92633 364 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 GPATCH3Q96I76 525 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 SPATC1LQ9H0A9 340 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 ARHGEF10LQ9HCE6 1279 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 ARPP21Q9UBL0 812 aaPredicted RBP17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 MYH8P13535 1937 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 SALL3Q9BXA9 1300 aa17.72■□□□□ 0.43
ATPAF2-204ENST00000467560 MINDY4BA8MYZ0 360 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 EVI5O60447 810 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 FLOT1O75955 427 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 HOXC6P09630 235 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 ERCC3P19447 782 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 AMOTL1Q8IY63 956 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 TRPV1Q8NER1 839 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
ATPAF2-204ENST00000467560 PFASO15067 1338 aa17.71■□□□□ 0.42
ATPAF2-204ENST00000467560 GLRX3O76003 335 aaKnown RBP17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 CAPN2P17655 700 aa17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 CYP2C19P33261 490 aa17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 NBPF3Q9H094 633 aa17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 NR2E3Q9Y5X4 410 aa17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
ATPAF2-204ENST00000467560 ROBO3Q96MS0 1386 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 GREB1LQ9C091 1923 aaPredicted RBP17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 COBLO75128 1261 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 PRDM1O75626 825 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 COL6A1P12109 1028 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 ADORA2AP29274 412 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 TMEM132BQ14DG7 1078 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 GIMAP6Q6P9H5 292 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 C11orf49Q9H6J7 331 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 SH2D4AQ9H788 454 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 ADAMTS5Q9UNA0 930 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 IVNS1ABPQ9Y6Y0 642 aa17.69■□□□□ 0.42
ATPAF2-204ENST00000467560 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 MX1P20591 662 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 PLS1Q14651 629 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 FAM83BQ5T0W9 1011 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 C7orf61Q8IZ16 206 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 IFNL3Q8IZI9 196 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
ATPAF2-204ENST00000467560 STAP2Q9UGK3 403 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms