RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 C17orf99Q6UX52 265 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 GMCL1P1Q8NEA9 526 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
MSH5-212ENST00000467319 MKL1Q969V6 931 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 WDR46O15213 610 aaKnown RBP13.06□□□□□ -0.32
MSH5-212ENST00000467319 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 RCSD1Q6JBY9 416 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 POTEEQ6S8J3 1075 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 LBX2Q6XYB7 198 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
MSH5-212ENST00000467319 ESR2Q92731 530 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 RPAP3Q9H6T3 665 aaPredicted RBP13.06□□□□□ -0.32
MSH5-212ENST00000467319 CNNM2Q9H8M5 875 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 GOPCQ9HD26 462 aa13.06□□□□□ -0.32
MSH5-212ENST00000467319 B4E1Z4 1266 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L15C9J2P7 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L13C9JLJ4 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L11C9JVI0 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L18D6R9N7 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L22D6RA61 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L17D6RBQ6 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L19D6RCP7 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L20D6RJB6 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 FKTNO75072 461 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 KDM4AO75164 1064 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 NDUFB10O96000 172 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 HERVK_113P62684 666 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
MSH5-212ENST00000467319 CAP1Q01518 475 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 ATP2B2Q01814 1243 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 USP17L24Q0WX57 530 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
MSH5-212ENST00000467319 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
MSH5-212ENST00000467319 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
MSH5-212ENST00000467319 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
MSH5-212ENST00000467319 E7EWF7 191 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 F5H6K3 240 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 SLC27A2O14975 620 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 OSBPP22059 807 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
MSH5-212ENST00000467319 SP3Q02447 781 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 KLRC3Q07444 240 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 FAM110CQ1W6H9 321 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 CREB3L3Q68CJ9 461 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 GMCL1Q96IK5 515 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 KRT23Q9C075 422 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 STX8Q9UNK0 236 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 MGAMO43451 1857 aa13.04□□□□□ -0.32
MSH5-212ENST00000467319 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
MSH5-212ENST00000467319 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
MSH5-212ENST00000467319 CYB5R4Q7L1T6 521 aa13.03□□□□□ -0.32
MSH5-212ENST00000467319 RASGRP2Q7LDG7 609 aa13.03□□□□□ -0.32
MSH5-212ENST00000467319 MB21D2Q8IYB1 491 aaPredicted RBP13.03□□□□□ -0.32
MSH5-212ENST00000467319 ENAHQ8N8S7 591 aaPredicted RBP13.03□□□□□ -0.32
MSH5-212ENST00000467319 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
MSH5-212ENST00000467319 ANKS1AQ92625 1134 aa13.03□□□□□ -0.32
MSH5-212ENST00000467319 KCNB2Q92953 911 aa13.03□□□□□ -0.32
MSH5-212ENST00000467319 P2RX7Q99572 595 aaKnown RBP13.03□□□□□ -0.32
MSH5-212ENST00000467319 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
MSH5-212ENST00000467319 ZSWIM5Q9P217 1185 aa13.03□□□□□ -0.32
MSH5-212ENST00000467319 CNMDO75829 334 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 REC8O95072 547 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 TOP1P11387 765 aaKnown RBP13.02□□□□□ -0.33
MSH5-212ENST00000467319 CTGFP29279 349 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 ANTXR2P58335 489 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 COL9A3Q14050 684 aaPredicted RBP13.02□□□□□ -0.33
MSH5-212ENST00000467319 SEC23AQ15436 765 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
MSH5-212ENST00000467319 IQCA1Q86XH1 822 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 TTC14Q96N46 770 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 ZSCAN10Q96SZ4 725 aaPredicted RBP13.02□□□□□ -0.33
MSH5-212ENST00000467319 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
MSH5-212ENST00000467319 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 TNKSO95271 1327 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
MSH5-212ENST00000467319 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.33
MSH5-212ENST00000467319 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 CTU1Q7Z7A3 348 aaKnown RBP13.01□□□□□ -0.33
MSH5-212ENST00000467319 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
MSH5-212ENST00000467319 ANKRD13CQ8N6S4 541 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 NCOA7Q8NI08 942 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 ARHGAP39Q9C0H5 1083 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms