RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 RBM26Q5T8P6 1007 aaKnown RBP12.75□□□□□ -0.37
MUC1-216ENST00000467134 RAB11FIP4Q86YS3 637 aa12.75□□□□□ -0.37
MUC1-216ENST00000467134 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
MUC1-216ENST00000467134 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
MUC1-216ENST00000467134 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
MUC1-216ENST00000467134 PHKBQ93100 1093 aa12.75□□□□□ -0.37
MUC1-216ENST00000467134 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
MUC1-216ENST00000467134 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
MUC1-216ENST00000467134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
MUC1-216ENST00000467134 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
MUC1-216ENST00000467134 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 PDHBP11177 359 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 U2AF2P26368 475 aaKnown RBP eCLIP12.74□□□□□ -0.37
MUC1-216ENST00000467134 LMOD1P29536 600 aaPredicted RBP12.74□□□□□ -0.37
MUC1-216ENST00000467134 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 PKN1Q16512 942 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
MUC1-216ENST00000467134 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 DCAF15Q66K64 600 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 KRT40Q6A162 431 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 TEX2Q8IWB9 1127 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
MUC1-216ENST00000467134 GMCL1Q96IK5 515 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
MUC1-216ENST00000467134 FOXP1Q9H334 677 aaPredicted RBP12.74□□□□□ -0.37
MUC1-216ENST00000467134 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 ADARB2Q9NS39 739 aaKnown RBP12.74□□□□□ -0.37
MUC1-216ENST00000467134 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
MUC1-216ENST00000467134 SHTN1A0MZ66 631 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 MBD3O95983 291 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 MMP1P03956 469 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 ASNSP08243 561 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 SCG2P13521 617 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 CAP2P40123 477 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
MUC1-216ENST00000467134 ICA1Q05084 483 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
MUC1-216ENST00000467134 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 ZBTB21Q9ULJ3 1066 aa12.73□□□□□ -0.37
MUC1-216ENST00000467134 MORC2Q9Y6X9 1032 aaPredicted RBP12.73□□□□□ -0.37
MUC1-216ENST00000467134 KLRF2D3W0D1 207 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
MUC1-216ENST00000467134 EGFRP00533 1210 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 CALML3P27482 149 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 KLHL40Q2TBA0 621 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
MUC1-216ENST00000467134 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 ZC3H15Q8WU90 426 aaKnown RBP12.72□□□□□ -0.37
MUC1-216ENST00000467134 DEFB129Q9H1M3 183 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
MUC1-216ENST00000467134 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
MUC1-216ENST00000467134 PHF20L1A8MW92 1017 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 PLA2G6O60733 806 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 GH2P01242 217 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 EEF2P13639 858 aaKnown RBP12.71□□□□□ -0.37
MUC1-216ENST00000467134 SEPT2Q15019 361 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 PPP1R18Q6NYC8 613 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
MUC1-216ENST00000467134 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 DAGLBQ8NCG7 672 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 CCDC12Q8WUD4 166 aaPredicted RBP12.71□□□□□ -0.37
MUC1-216ENST00000467134 MTMR8Q96EF0 704 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 PHF20Q9BVI0 1012 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 ZNF112Q9UJU3 913 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 TMX2Q9Y320 296 aa12.71□□□□□ -0.37
MUC1-216ENST00000467134 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.37
MUC1-216ENST00000467134 ESYT2A0FGR8 921 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 FAM196BA6NMK8 535 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 TRAK2O60296 914 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 CTNND1O60716 968 aaKnown RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 YEATS4O95619 227 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 UBE2HP62256 183 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 FOXD4L5Q5VV16 416 aaPredicted RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 BTNL9Q6UXG8 535 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 STAG2Q8N3U4 1231 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 FOXD4L4Q8WXT5 416 aaPredicted RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
MUC1-216ENST00000467134 ZNF341Q9BYN7 854 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
MUC1-216ENST00000467134 OTOFQ9HC10 1997 aa12.69□□□□□ -0.38
MUC1-216ENST00000467134 GLTPD2A6NH11 291 aa12.69□□□□□ -0.38
MUC1-216ENST00000467134 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
MUC1-216ENST00000467134 CYTH3O43739 400 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms