RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 FOXQ1Q9C009 403 aa5.89□□□□□ -1.47
VPS13A-209ENST00000467124 SLKQ9H2G2 1235 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 STK17AQ9UEE5 414 aa5.89□□□□□ -1.47
VPS13A-209ENST00000467124 DAGLAQ9Y4D2 1042 aa5.89□□□□□ -1.47
VPS13A-209ENST00000467124 RGS13O14921 159 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 DNAJC6O75061 913 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 CLEC3AO75596 197 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 PMS1P54277 932 aaKnown RBP5.88□□□□□ -1.47
VPS13A-209ENST00000467124 C16orf86Q6ZW13 317 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 CCDC144CPQ8IYA2 1237 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 ADCY4Q8NFM4 1077 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 RIN3Q8TB24 985 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 COX4I2Q96KJ9 171 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 CCDC74BQ96LY2 380 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 MKRN2Q9H000 416 aaKnown RBP5.88□□□□□ -1.47
VPS13A-209ENST00000467124 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS13A-209ENST00000467124 SEMA6CQ9H3T2 930 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
VPS13A-209ENST00000467124 APEX2Q9UBZ4 518 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 SUSD2Q9UGT4 822 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 COL4A3BPQ9Y5P4 624 aa5.88□□□□□ -1.47
VPS13A-209ENST00000467124 DHX15O43143 795 aaKnown RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 TBX1O43435 398 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 ADCY3O60266 1144 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 NAT2P11245 290 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 IREB2P48200 963 aaKnown RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 ZNF143P52747 638 aaPredicted RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 IGBP1P78318 339 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 FAM209AQ5JX71 171 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 HEATR6Q6AI08 1181 aaKnown RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 KIAA0907Q7Z7F0 614 aaPredicted RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 CDH24Q86UP0 819 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 FAM20CQ8IXL6 584 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 DHX37Q8IY37 1157 aaKnown RBP5.87□□□□□ -1.47
VPS13A-209ENST00000467124 MIPEPQ99797 713 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 HAUS7Q99871 368 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 EPN3Q9H201 632 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 SPC25Q9HBM1 224 aa5.87□□□□□ -1.47
VPS13A-209ENST00000467124 A0A1W2PQU0 124 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 DYNC1LI2O43237 492 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-209ENST00000467124 IBSPP21815 317 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-209ENST00000467124 MAP4P27816 1152 aaKnown RBP5.86□□□□□ -1.47
VPS13A-209ENST00000467124 ETV3P41162 512 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 RNF4P78317 190 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 CDPF1Q6NVV7 123 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 LRRN4CLQ8ND94 238 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 GIMAP7Q8NHV1 300 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 FBLIM1Q8WUP2 373 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 MEGF10Q96KG7 1140 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 UBL7Q96S82 380 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-209ENST00000467124 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 ZNF451Q9Y4E5 1061 aa5.86□□□□□ -1.47
VPS13A-209ENST00000467124 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-209ENST00000467124 CBFA2T2O43439 604 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 ITGAVP06756 1048 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 NFICP08651 508 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 GRIA2P42262 883 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 ANAPC15P60006 121 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 CDK5R2Q13319 367 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 SGO2Q562F6 1265 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 PAOXQ6QHF9 649 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 ZBTB38Q8NAP3 1195 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-209ENST00000467124 ZSWIM2Q8NEG5 633 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 PPP1R13LQ8WUF5 828 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 BRF1Q92994 677 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 FEZ1Q99689 392 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 CDC6Q99741 560 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 APBA2Q99767 749 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 SSBP4Q9BWG4 385 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-209ENST00000467124 ASPNQ9BXN1 380 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 PCDH12Q9NPG4 1184 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 ARHGEF4Q9NR80 690 aa5.85□□□□□ -1.47
VPS13A-209ENST00000467124 FAM95CA0A1B0GW59 222 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 ANKRD34BA5PLL1 514 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 RAB11FIP3O75154 756 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 LRRN2O75325 713 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 RAPGEF3O95398 923 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 BMP3P12645 472 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 RXRBP28702 533 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 MASP1P48740 699 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 PPP2R5DQ14738 602 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 TCEA2Q15560 299 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 DALRD3Q5D0E6 543 aaKnown RBP5.84□□□□□ -1.47
VPS13A-209ENST00000467124 LETMD1Q6P1Q0 360 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 SEZ6L2Q6UXD5 910 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 CLEC10AQ8IUN9 316 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 LRRC47Q8N1G4 583 aaKnown RBP5.84□□□□□ -1.47
VPS13A-209ENST00000467124 ARMC10Q8N2F6 343 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 JMYQ8N9B5 988 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 DCAF5Q96JK2 942 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 KLHL25Q9H0H3 589 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 FBXL21Q9UKT6 434 aa5.84□□□□□ -1.47
VPS13A-209ENST00000467124 BLACEA4D250 179 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 IQCA1LA6NCM1 817 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 AGRPO00253 132 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 PRODHO43272 600 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms