RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 STRCQ7RTU9 1775 aa12.41□□□□□ -0.42
SFXN3-204ENST00000466982 TPD52L2O43399 206 aaKnown RBP12.41□□□□□ -0.42
SFXN3-204ENST00000466982 PRC1O43663 620 aa12.41□□□□□ -0.42
SFXN3-204ENST00000466982 ATP1A1P05023 1023 aaKnown RBP12.41□□□□□ -0.42
SFXN3-204ENST00000466982 KRT40Q6A162 431 aa12.41□□□□□ -0.42
SFXN3-204ENST00000466982 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
SFXN3-204ENST00000466982 SMYD4Q8IYR2 804 aaPredicted RBP12.41□□□□□ -0.42
SFXN3-204ENST00000466982 NKX2-3Q8TAU0 364 aa12.41□□□□□ -0.42
SFXN3-204ENST00000466982 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
SFXN3-204ENST00000466982 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
SFXN3-204ENST00000466982 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
SFXN3-204ENST00000466982 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 FAM237AA0A1B0GTK4 181 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 SHTN1A0MZ66 631 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 ZNF185O15231 689 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 TUBBP07437 444 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
SFXN3-204ENST00000466982 CCT6AP40227 531 aaKnown RBP12.4□□□□□ -0.42
SFXN3-204ENST00000466982 PBX1P40424 430 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 PPFIA1Q13136 1202 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 PDCLQ13371 301 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 MORC3Q14149 939 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 SAAL1Q96ER3 474 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 PLEKHG4BQ96PX9 1271 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 CHP1Q99653 195 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 NAA15Q9BXJ9 866 aaKnown RBP12.4□□□□□ -0.42
SFXN3-204ENST00000466982 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
SFXN3-204ENST00000466982 MAST3O60307 1309 aa12.4□□□□□ -0.42
SFXN3-204ENST00000466982 PTPN12Q05209 780 aaKnown RBP12.4□□□□□ -0.43
SFXN3-204ENST00000466982 TRAPPC11Q7Z392 1133 aa12.4□□□□□ -0.43
SFXN3-204ENST00000466982 MLKLQ8NB16 471 aa12.4□□□□□ -0.43
SFXN3-204ENST00000466982 HOMER3Q9NSC5 361 aa12.4□□□□□ -0.43
SFXN3-204ENST00000466982 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.43
SFXN3-204ENST00000466982 CEMIPQ8WUJ3 1361 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 M0R2C6 588 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 SARSP49591 514 aaKnown RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 ANTXR2P58335 489 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 ACTN3Q08043 901 aaPredicted RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 CCNI2Q6ZMN8 369 aaPredicted RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 NEUROD6Q96NK8 337 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 REXO2Q9Y3B8 237 aaKnown RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 NALCNQ8IZF0 1738 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 PDE2AO00408 941 aaPredicted RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 HOXB7P09629 217 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 PPARDQ03181 441 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 SPDYE1Q8NFV5 336 aaPredicted RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 ARL8AQ96BM9 186 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
SFXN3-204ENST00000466982 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
SFXN3-204ENST00000466982 UTYO14607 1347 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 ZSCAN9O15535 394 aaPredicted RBP12.38□□□□□ -0.43
SFXN3-204ENST00000466982 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 NLRP6P59044 892 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 TIMM10P62072 90 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
SFXN3-204ENST00000466982 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 KIAA1328Q86T90 577 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 HDAC7Q8WUI4 952 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 TBC1D5Q92609 795 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 XAGE2Q96GT9 111 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.38□□□□□ -0.43
SFXN3-204ENST00000466982 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 RTN3O95197 1032 aaPredicted RBP12.38□□□□□ -0.43
SFXN3-204ENST00000466982 PYGBP11216 843 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 PAX3P23760 479 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 PEX19P40855 299 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 MFSD4BQ5TF39 518 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 SND1Q7KZF4 910 aaKnown RBP eCLIP12.38□□□□□ -0.43
SFXN3-204ENST00000466982 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 CENPHQ9H3R5 247 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
SFXN3-204ENST00000466982 FOXP2O15409 715 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 ZEB2O60315 1214 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 RFX5P48382 616 aaPredicted RBP12.37□□□□□ -0.43
SFXN3-204ENST00000466982 PLCD1P51178 756 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 SLC8A3P57103 927 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 RIC3Q7Z5B4 369 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 KIRREL3Q8IZU9 778 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
SFXN3-204ENST00000466982 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 SH3GL2Q99962 352 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 ABHD10Q9NUJ1 306 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
SFXN3-204ENST00000466982 NWD1Q149M9 1564 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 RBM47A0AV96 593 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms