RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GRXCR2A6NFK2 248 aa15.84■□□□□ 0.13
UBR4-210ENST00000466969 PDE8BO95263 885 aa15.84■□□□□ 0.13
UBR4-210ENST00000466969 RRP1BQ14684 758 aaKnown RBP15.84■□□□□ 0.13
UBR4-210ENST00000466969 SUGP1Q8IWZ8 645 aaKnown RBP15.84■□□□□ 0.13
UBR4-210ENST00000466969 VTI1AQ96AJ9 217 aa15.84■□□□□ 0.13
UBR4-210ENST00000466969 LMCD1Q9NZU5 365 aa15.84■□□□□ 0.13
UBR4-210ENST00000466969 MYH13Q9UKX3 1938 aa15.84■□□□□ 0.13
UBR4-210ENST00000466969 MYO15AQ9UKN7 3530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 RIF1Q5UIP0 2472 aaKnown RBP15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L15C9J2P7 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L13C9JLJ4 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L11C9JVI0 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L18D6R9N7 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L22D6RA61 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L17D6RBQ6 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L19D6RCP7 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L20D6RJB6 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 USP17L24Q0WX57 530 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 RPUSD2Q8IZ73 545 aaKnown RBP15.83■□□□□ 0.12
UBR4-210ENST00000466969 NRBP1Q9UHY1 535 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
UBR4-210ENST00000466969 ZNF853P0CG23 659 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 CDK7P50613 346 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 GNAI1P63096 354 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 G2E3Q7L622 706 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 BMP8AQ7Z5Y6 402 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 SLF2Q8IX21 1173 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 EMILIN3Q9NT22 766 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 BTBD7Q9P203 1132 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 HERC5Q9UII4 1024 aaKnown RBP15.82■□□□□ 0.12
UBR4-210ENST00000466969 FAM50BQ9Y247 325 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 CHD8Q9HCK8 2581 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 ELP1O95163 1332 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 TRIOO75962 3097 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 CACNA1HO95180 2353 aa15.82■□□□□ 0.12
UBR4-210ENST00000466969 FAM186AA6NE01 2351 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 COBLO75128 1261 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 ADAMTS4O75173 837 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 BTDP43251 543 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 TAP1Q03518 808 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
UBR4-210ENST00000466969 PBXIP1Q96AQ6 731 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 IFT57Q9NWB7 429 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 MYH2Q9UKX2 1941 aa15.81■□□□□ 0.12
UBR4-210ENST00000466969 KMT2BQ9UMN6 2715 aaPredicted RBP15.81■□□□□ 0.12
UBR4-210ENST00000466969 ARVCFO00192 962 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 AKR1A1P14550 325 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 PUM3Q15397 648 aaKnown RBP15.8■□□□□ 0.12
UBR4-210ENST00000466969 KCNA10Q16322 511 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 DZIP1Q86YF9 867 aaKnown RBP15.8■□□□□ 0.12
UBR4-210ENST00000466969 FAM126BQ8IXS8 530 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 COL26A1Q96A83 441 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 MAML3Q96JK9 1138 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 HIPK3Q9H422 1215 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 PRKAG3Q9UGI9 489 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 ZNF236Q9UL36 1845 aa15.8■□□□□ 0.12
UBR4-210ENST00000466969 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
UBR4-210ENST00000466969 MED19A0JLT2 244 aaPredicted RBP15.79■□□□□ 0.12
UBR4-210ENST00000466969 SOWAHBA6NEL2 793 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 LPXNO60711 386 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
UBR4-210ENST00000466969 CCL23P55773 120 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 ZP2Q05996 745 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 LRRC24Q50LG9 513 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 LBX2Q6XYB7 198 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 ASCL5Q7RTU5 278 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 VGLL2Q8N8G2 317 aa15.79■□□□□ 0.12
UBR4-210ENST00000466969 CLSPNQ9HAW4 1339 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 SALL1Q9NSC2 1324 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 FLIIQ13045 1269 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 CATSPERGQ6ZRH7 1159 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 ZGPATQ8N5A5 531 aaKnown RBP15.78■□□□□ 0.12
UBR4-210ENST00000466969 CNTNAP3BQ96NU0 1288 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 CNTNAP3Q9BZ76 1288 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 MUTYHQ9UIF7 546 aa15.78■□□□□ 0.12
UBR4-210ENST00000466969 TPRP12270 2363 aaKnown RBP15.78■□□□□ 0.12
UBR4-210ENST00000466969 TECTAO75443 2155 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 ROBO3Q96MS0 1386 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 PROB1E7EW31 1015 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.12
UBR4-210ENST00000466969 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.12
UBR4-210ENST00000466969 HERC4Q5GLZ8 1057 aaPredicted RBP15.77■□□□□ 0.12
UBR4-210ENST00000466969 TSPYL6Q8N831 410 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 LENG1Q96BZ8 264 aaPredicted RBP15.77■□□□□ 0.12
UBR4-210ENST00000466969 FEZ1Q99689 392 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 MOV10L1Q9BXT6 1211 aaKnown RBP15.77■□□□□ 0.12
UBR4-210ENST00000466969 GINM1Q9NU53 330 aa15.77■□□□□ 0.12
UBR4-210ENST00000466969 GNL3LQ9NVN8 582 aaKnown RBP15.77■□□□□ 0.12
UBR4-210ENST00000466969 UMODL1Q5DID0 1318 aa15.76■□□□□ 0.11
UBR4-210ENST00000466969 C19orf67A6NJJ6 358 aa15.76■□□□□ 0.11
UBR4-210ENST00000466969 GRM8O00222 908 aa15.76■□□□□ 0.11
UBR4-210ENST00000466969 IRS1P35568 1242 aa15.76■□□□□ 0.11
UBR4-210ENST00000466969 ADHFE1Q8IWW8 467 aa15.76■□□□□ 0.11
UBR4-210ENST00000466969 PCSK9Q8NBP7 692 aaKnown RBP15.76■□□□□ 0.11
UBR4-210ENST00000466969 KLHDC9Q8NEP7 349 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms