RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 CUL4AQ13619 759 aa15.44■□□□□ 0.06
SEC22A-203ENST00000466950 SIAH1Q8IUQ4 282 aa15.44■□□□□ 0.06
SEC22A-203ENST00000466950 ZKSCAN4Q969J2 545 aaPredicted RBP15.44■□□□□ 0.06
SEC22A-203ENST00000466950 CLIP2Q9UDT6 1046 aa15.44■□□□□ 0.06
SEC22A-203ENST00000466950 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
SEC22A-203ENST00000466950 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
SEC22A-203ENST00000466950 CELF2O95319 508 aaKnown RBP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 LARGE1O95461 756 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 METAP2P50579 478 aaKnown RBP eCLIP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 FSTL1Q12841 308 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 TTLL12Q14166 644 aaPredicted RBP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 GRM4Q14833 912 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 NOL8Q76FK4 1167 aaKnown RBP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 MICU3Q86XE3 530 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 C2orf69Q8N8R5 385 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 KIAA1683Q9H0B3 1180 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 SLKQ9H2G2 1235 aaPredicted RBP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 GOPCQ9HD26 462 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 RBM28Q9NW13 759 aaKnown RBP15.43■□□□□ 0.06
SEC22A-203ENST00000466950 FZD1Q9UP38 647 aa15.43■□□□□ 0.06
SEC22A-203ENST00000466950 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 KIF5BP33176 963 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 PPATQ06203 517 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 PRKG1Q13976 671 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 ERO1BQ86YB8 467 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 ZNF280CQ8ND82 737 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 DCAF4Q8WV16 495 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 INTS4Q96HW7 963 aaKnown RBP15.42■□□□□ 0.06
SEC22A-203ENST00000466950 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
SEC22A-203ENST00000466950 COL11A1P12107 1806 aaPredicted RBP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 A0A0G2JMZ2 1700 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 A0A1W2PRG0 241 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 DHX16O60231 1041 aaKnown RBP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 PDHBP11177 359 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 USP14P54578 494 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 FMR1Q06787 632 aaKnown RBP eCLIP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 ST3GAL1Q11201 340 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 SCRN1Q12765 414 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 PPIL2Q13356 520 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 RTN1Q16799 776 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 ASPRV1Q53RT3 343 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 CTCFLQ8NI51 663 aaPredicted RBP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 LPAR1Q92633 364 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 C12orf42Q96LP6 360 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 LLPHQ9BRT6 129 aaKnown RBP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 MYL10Q9BUA6 226 aa15.41■□□□□ 0.06
SEC22A-203ENST00000466950 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
SEC22A-203ENST00000466950 C19orf81C9J6K1 198 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 USP17L10C9JJH3 530 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 ECE1P42892 770 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 GNAQP50148 359 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
SEC22A-203ENST00000466950 CST9Q5W186 159 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 MOB2Q70IA6 237 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 FANCBQ8NB91 859 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 ACER1Q8TDN7 264 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 NUP133Q8WUM0 1156 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 FEZ1Q99689 392 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 LZTS2Q9BRK4 669 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
SEC22A-203ENST00000466950 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
SEC22A-203ENST00000466950 AFG3L2Q9Y4W6 797 aa15.4■□□□□ 0.06
SEC22A-203ENST00000466950 RBBP6Q7Z6E9 1792 aaKnown RBP15.39■□□□□ 0.05
SEC22A-203ENST00000466950 PALM3A6NDB9 673 aaPredicted RBP15.39■□□□□ 0.05
SEC22A-203ENST00000466950 F5H6K3 240 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 CDKL5O76039 1030 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 NDUFB10O96000 172 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
SEC22A-203ENST00000466950 SMARCA1P28370 1054 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 BACE1P56817 501 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 KLRC3Q07444 240 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 ZNF543Q08ER8 600 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 SH3D19Q5HYK7 790 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 CPLX2Q6PUV4 134 aaKnown RBP15.39■□□□□ 0.05
SEC22A-203ENST00000466950 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 CLMNQ96JQ2 1002 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 IPO9Q96P70 1041 aaKnown RBP15.39■□□□□ 0.05
SEC22A-203ENST00000466950 MAD2L2Q9UI95 211 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 KCNH4Q9UQ05 1017 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
SEC22A-203ENST00000466950 ZHX2Q9Y6X8 837 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 STK36Q9NRP7 1315 aa15.39■□□□□ 0.05
SEC22A-203ENST00000466950 UBE2Q2LH0YL09 131 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 CXCL11O14625 94 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 WDR46O15213 610 aaKnown RBP15.38■□□□□ 0.05
SEC22A-203ENST00000466950 IFNAR1P17181 557 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 RXRAP19793 462 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 STK3Q13188 491 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 NTRK3Q16288 839 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 SLFN13Q68D06 897 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 USP17L2Q6R6M4 530 aa15.38■□□□□ 0.05
SEC22A-203ENST00000466950 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms