RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 ZCCHC17Q9NP64 241 aaKnown RBP16.4■□□□□ 0.22
UBA3-209ENST00000466763 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 STX8Q9UNK0 236 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 TMX2Q9Y320 296 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 TTLL1O95922 423 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBA3-209ENST00000466763 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
UBA3-209ENST00000466763 SMCR8Q8TEV9 937 aaPredicted RBP16.39■□□□□ 0.21
UBA3-209ENST00000466763 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
UBA3-209ENST00000466763 ZKSCAN3Q9BRR0 538 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
UBA3-209ENST00000466763 MTMR7Q9Y216 660 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 MYH4Q9Y623 1939 aa16.39■□□□□ 0.21
UBA3-209ENST00000466763 E7EWF7 191 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 SLC27A2O14975 620 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 ECM2O94769 699 aaPredicted RBP16.38■□□□□ 0.21
UBA3-209ENST00000466763 REC8O95072 547 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 VCAM1P19320 739 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 CREB3L3Q68CJ9 461 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
UBA3-209ENST00000466763 NKX2-3Q8TAU0 364 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 TANGO6Q9C0B7 1094 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 RPAP3Q9H6T3 665 aaPredicted RBP16.38■□□□□ 0.21
UBA3-209ENST00000466763 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 SLC45A1Q9Y2W3 748 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 TAF6LQ9Y6J9 622 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
UBA3-209ENST00000466763 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
UBA3-209ENST00000466763 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 GPR25O00155 361 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 IQCA1Q86XH1 822 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
UBA3-209ENST00000466763 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
UBA3-209ENST00000466763 F5H6K3 240 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 TLR2O60603 784 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 KLRC3Q07444 240 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 NECTIN1Q15223 517 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 NCOA7Q8NI08 942 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 LPAR1Q92633 364 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 P2RX7Q99572 595 aaKnown RBP16.36■□□□□ 0.21
UBA3-209ENST00000466763 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 CFHR5Q9BXR6 569 aa16.36■□□□□ 0.21
UBA3-209ENST00000466763 FKTNO75072 461 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 HOXA7P31268 230 aaPredicted RBP16.35■□□□□ 0.21
UBA3-209ENST00000466763 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 FAM83BQ5T0W9 1011 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 CATSPERGQ6ZRH7 1159 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 ZNF296Q8WUU4 475 aaPredicted RBP16.35■□□□□ 0.21
UBA3-209ENST00000466763 MKL1Q969V6 931 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
UBA3-209ENST00000466763 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
UBA3-209ENST00000466763 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
UBA3-209ENST00000466763 NDUFB10O96000 172 aa16.34■□□□□ 0.21
UBA3-209ENST00000466763 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
UBA3-209ENST00000466763 ZKSCAN1P17029 563 aaPredicted RBP16.34■□□□□ 0.21
UBA3-209ENST00000466763 NT5C2P49902 561 aa16.34■□□□□ 0.21
UBA3-209ENST00000466763 SP3Q02447 781 aa16.34■□□□□ 0.21
UBA3-209ENST00000466763 CYB5R4Q7L1T6 521 aa16.34■□□□□ 0.21
UBA3-209ENST00000466763 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
UBA3-209ENST00000466763 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
UBA3-209ENST00000466763 TMEM47Q9BQJ4 181 aa16.34■□□□□ 0.21
UBA3-209ENST00000466763 ERICH2A1L162 156 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 FLOT1O75955 427 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 MCCP23508 829 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 HERVK_113P62684 666 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 C17orf99Q6UX52 265 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 TTC14Q96N46 770 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 PAGR1Q9BTK6 254 aa16.33■□□□□ 0.2
UBA3-209ENST00000466763 IFIT3O14879 490 aaKnown RBP16.32■□□□□ 0.2
UBA3-209ENST00000466763 TNKSO95271 1327 aa16.32■□□□□ 0.2
UBA3-209ENST00000466763 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
UBA3-209ENST00000466763 IKQ13123 557 aaPredicted RBP16.32■□□□□ 0.2
UBA3-209ENST00000466763 COG2Q14746 738 aa16.32■□□□□ 0.2
UBA3-209ENST00000466763 KIF22Q14807 665 aa16.32■□□□□ 0.2
UBA3-209ENST00000466763 GMCL1P1Q8NEA9 526 aa16.32■□□□□ 0.2
UBA3-209ENST00000466763 CD99L2Q8TCZ2 262 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms