RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 TSGA10IPQ3SY00 556 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 CYB5R4Q7L1T6 521 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 LPAR1Q92633 364 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 KCNB2Q92953 911 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 TTC14Q96N46 770 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
DNMT3A-208ENST00000466601 F5H6K3 240 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 RAD21O60216 631 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 VCAM1P19320 739 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 OSBPP22059 807 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 KLRC3Q07444 240 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 SPICE1Q8N0Z3 855 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 LRRC47Q8N1G4 583 aaKnown RBP17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 CFHR5Q9BXR6 569 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
DNMT3A-208ENST00000466601 LOC285556D6RIA3 1793 aa17.02■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 FOXN1O15353 648 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 MCCP23508 829 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 CRHR2Q13324 411 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 KRT32Q14532 448 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 PARK7Q99497 189 aaKnown RBP17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
DNMT3A-208ENST00000466601 TNKSO95271 1327 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 WDR46O15213 610 aaKnown RBP17■□□□□ 0.31
DNMT3A-208ENST00000466601 SEC24BO95487 1268 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 NDUFB10O96000 172 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 CYP2C8P10632 490 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 TOP1P11387 765 aaKnown RBP17■□□□□ 0.31
DNMT3A-208ENST00000466601 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
DNMT3A-208ENST00000466601 CATSPERGQ6ZRH7 1159 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 ANKS1AQ92625 1134 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 NEK1Q96PY6 1258 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 ASCC2Q9H1I8 757 aaPredicted RBP17■□□□□ 0.31
DNMT3A-208ENST00000466601 R3HDMLQ9H3Y0 253 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 MYH4Q9Y623 1939 aa17■□□□□ 0.31
DNMT3A-208ENST00000466601 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 TLR2O60603 784 aa16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 MCM5P33992 734 aa16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 ANTXR2P58335 489 aa16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 ADCK5Q3MIX3 580 aa16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 SLFN13Q68D06 897 aa16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 CHST3Q7LGC8 479 aa16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 ENAHQ8N8S7 591 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-208ENST00000466601 ERICH2A1L162 156 aa16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 PRC1O43663 620 aa16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 HSPA8P11142 646 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 SART3Q15020 963 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 SEC23AQ15436 765 aa16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 SMCR8Q8TEV9 937 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 P2RX7Q99572 595 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 TANGO6Q9C0B7 1094 aa16.98■□□□□ 0.31
DNMT3A-208ENST00000466601 COL9A3Q14050 684 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-208ENST00000466601 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
DNMT3A-208ENST00000466601 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-208ENST00000466601 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
DNMT3A-208ENST00000466601 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
DNMT3A-208ENST00000466601 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
DNMT3A-208ENST00000466601 ADGRA2Q96PE1 1338 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 GPR25O00155 361 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 BMP3P12645 472 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 SLC1A4P43007 532 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 HERVK_113P62684 666 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 COG2Q14746 738 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 WTAPQ15007 396 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 C17orf99Q6UX52 265 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 DHX32Q7L7V1 743 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms