RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GMCL1P1Q8NEA9 526 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 SNX21Q969T3 373 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 OPTNQ96CV9 577 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 WNK4Q96J92 1243 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 HPS5Q9UPZ3 1129 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 KCNH4Q9UQ05 1017 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
VCP-204ENST00000466100 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 KLF18A0A0U1RQI7 1052 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 DDAH1O94760 285 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 APLP1P51693 650 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 RCAN1P53805 252 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 BACE1P56817 501 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 FGD1P98174 961 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 ATP2B2Q01814 1243 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 SPP2Q13103 211 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 ZNF274Q96GC6 653 aaPredicted RBP13.05□□□□□ -0.32
VCP-204ENST00000466100 HHIPL1Q96JK4 782 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 C12orf42Q96LP6 360 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
VCP-204ENST00000466100 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 SH2D4AQ9H788 454 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
VCP-204ENST00000466100 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
VCP-204ENST00000466100 A0A0G2JLL6 359 aaPredicted RBP13.04□□□□□ -0.32
VCP-204ENST00000466100 CCDC69A6NI79 296 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 GOLGA8BA8MQT2 603 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 IRF6O14896 467 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 NDUFB10O96000 172 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 PDHBP11177 359 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
VCP-204ENST00000466100 MCM2P49736 904 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 ST3GAL1Q11201 340 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 DGKZQ13574 1117 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 MTMR2Q13614 643 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 MOGSQ13724 837 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 ME3Q16798 604 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 SH3D19Q5HYK7 790 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 NFXL1Q6ZNB6 911 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 PRRT2Q7Z6L0 340 aaPredicted RBP13.04□□□□□ -0.32
VCP-204ENST00000466100 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 GMCL1Q96IK5 515 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 MAP3K14Q99558 947 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 LIMCH1Q9UPQ0 1083 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
VCP-204ENST00000466100 F5H6K3 240 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 CXCL11O14625 94 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 ZBTB43O43298 467 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 PFKFB2O60825 505 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 SLC10A3P09131 477 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
VCP-204ENST00000466100 KLRC3Q07444 240 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 GRM4Q14833 912 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 RGMBQ6NW40 437 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
VCP-204ENST00000466100 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 FEZ1Q99689 392 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
VCP-204ENST00000466100 FAM217BQ9NTX9 383 aaPredicted RBP13.03□□□□□ -0.32
VCP-204ENST00000466100 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 FAM155AB1AL88 458 aaPredicted RBP13.02□□□□□ -0.33
VCP-204ENST00000466100 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 RXRAP19793 462 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 USP14P54578 494 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 HMGCS2P54868 508 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
VCP-204ENST00000466100 SLFN13Q68D06 897 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 LPAR1Q92633 364 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 GTF3C6Q969F1 213 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 MS4A4AQ96JQ5 239 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.33
VCP-204ENST00000466100 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
VCP-204ENST00000466100 SMCHD1A6NHR9 2005 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 WDR46O15213 610 aaKnown RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 CALM1P0DP23 149 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 CALM2P0DP24 149 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 CALM3P0DP25 149 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 VCAM1P19320 739 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 CDC27P30260 824 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 METAP2P50579 478 aaKnown RBP eCLIP13.01□□□□□ -0.33
VCP-204ENST00000466100 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms