RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CHRNEQ04844 493 aa7.36□□□□□ -1.23
LRCH3-211ENST00000466054 SNX17Q15036 470 aa7.36□□□□□ -1.23
LRCH3-211ENST00000466054 TIGD5Q53EQ6 642 aa7.36□□□□□ -1.23
LRCH3-211ENST00000466054 ZDHHC14Q8IZN3 488 aa7.36□□□□□ -1.23
LRCH3-211ENST00000466054 SIGLEC10Q96LC7 697 aa7.36□□□□□ -1.23
LRCH3-211ENST00000466054 GCM1Q9NP62 436 aa7.36□□□□□ -1.23
LRCH3-211ENST00000466054 RBM47A0AV96 593 aaKnown RBP7.35□□□□□ -1.23
LRCH3-211ENST00000466054 OR14I1A6ND48 311 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
LRCH3-211ENST00000466054 DUSP4Q13115 394 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 NR0B2Q15466 257 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 ZNF326Q5BKZ1 582 aaKnown RBP7.35□□□□□ -1.23
LRCH3-211ENST00000466054 RASIP1Q5U651 963 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 FEZF2Q8TBJ5 459 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 DPH2Q9BQC3 489 aaPredicted RBP7.35□□□□□ -1.23
LRCH3-211ENST00000466054 SRCIN1Q9C0H9 1055 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 SIRT5Q9NXA8 310 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 KCNH3Q9ULD8 1083 aa7.35□□□□□ -1.23
LRCH3-211ENST00000466054 FRMD6Q96NE9 622 aa7.34□□□□□ -1.23
LRCH3-211ENST00000466054 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
LRCH3-211ENST00000466054 DUSP15Q9H1R2 295 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-211ENST00000466054 SP110Q9HB58 689 aa7.34□□□□□ -1.23
LRCH3-211ENST00000466054 ITGAEP38570 1179 aa7.33□□□□□ -1.24
LRCH3-211ENST00000466054 SRSF3P84103 164 aaKnown RBP7.33□□□□□ -1.24
LRCH3-211ENST00000466054 NFKB2Q00653 900 aa7.33□□□□□ -1.24
LRCH3-211ENST00000466054 ZXDCQ2QGD7 858 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-211ENST00000466054 GAB4Q2WGN9 574 aa7.33□□□□□ -1.24
LRCH3-211ENST00000466054 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
LRCH3-211ENST00000466054 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
LRCH3-211ENST00000466054 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
LRCH3-211ENST00000466054 PTPN11Q06124 597 aaPredicted RBP7.32□□□□□ -1.24
LRCH3-211ENST00000466054 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.32□□□□□ -1.24
LRCH3-211ENST00000466054 TSPYL5Q86VY4 417 aaPredicted RBP7.32□□□□□ -1.24
LRCH3-211ENST00000466054 ANKS4BQ8N8V4 417 aa7.32□□□□□ -1.24
LRCH3-211ENST00000466054 PANK1Q8TE04 598 aa7.32□□□□□ -1.24
LRCH3-211ENST00000466054 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
LRCH3-211ENST00000466054 PCDHA11Q9Y5I1 949 aa7.32□□□□□ -1.24
LRCH3-211ENST00000466054 GIPC1O14908 333 aa7.31□□□□□ -1.24
LRCH3-211ENST00000466054 PSPNO60542 156 aa7.31□□□□□ -1.24
LRCH3-211ENST00000466054 CELA3AP09093 270 aa7.31□□□□□ -1.24
LRCH3-211ENST00000466054 ZNF16P17020 682 aaPredicted RBP7.31□□□□□ -1.24
LRCH3-211ENST00000466054 SPATS1Q496A3 300 aa7.31□□□□□ -1.24
LRCH3-211ENST00000466054 SIRT2Q8IXJ6 389 aa7.31□□□□□ -1.24
LRCH3-211ENST00000466054 Q96M66 194 aa7.31□□□□□ -1.24
LRCH3-211ENST00000466054 PGRP06401 933 aa7.3□□□□□ -1.24
LRCH3-211ENST00000466054 PLP2Q04941 152 aa7.3□□□□□ -1.24
LRCH3-211ENST00000466054 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
LRCH3-211ENST00000466054 SPG7Q9UQ90 795 aa7.3□□□□□ -1.24
LRCH3-211ENST00000466054 SLC22A31A6NKX4 558 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 GNA15P30679 374 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 GALK1P51570 392 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 XPCQ01831 940 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-211ENST00000466054 VMACQ2NL98 169 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 OLFML2BQ68BL8 750 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 MRPL41Q8IXM3 137 aaKnown RBP7.29□□□□□ -1.24
LRCH3-211ENST00000466054 DACT3Q96B18 629 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-211ENST00000466054 TMEM87BQ96K49 555 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 TEPSINQ96N21 525 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 SETDB2Q96T68 719 aa7.29□□□□□ -1.24
LRCH3-211ENST00000466054 DUSP9Q99956 384 aaKnown RBP7.29□□□□□ -1.24
LRCH3-211ENST00000466054 RBAK-RBAKDNI3L0D1 243 aa7.28□□□□□ -1.24
LRCH3-211ENST00000466054 CDK8P49336 464 aa7.28□□□□□ -1.24
LRCH3-211ENST00000466054 SLC6A19Q695T7 634 aa7.28□□□□□ -1.24
LRCH3-211ENST00000466054 GAL3ST3Q96A11 431 aa7.28□□□□□ -1.24
LRCH3-211ENST00000466054 TJP2Q9UDY2 1190 aa7.28□□□□□ -1.24
LRCH3-211ENST00000466054 PARP2Q9UGN5 583 aa7.28□□□□□ -1.24
LRCH3-211ENST00000466054 MBD1Q9UIS9 605 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-211ENST00000466054 ZC3H12DA2A288 527 aaKnown RBP7.27□□□□□ -1.25
LRCH3-211ENST00000466054 INSRRP14616 1297 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 DAB2P98082 770 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
LRCH3-211ENST00000466054 PDE4BQ07343 736 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 PUM1Q14671 1186 aaKnown RBP eCLIP7.27□□□□□ -1.25
LRCH3-211ENST00000466054 TMC4Q7Z404 712 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 DTWD2Q8NBA8 298 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 GPR20Q99678 358 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 BDH2Q9BUT1 245 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 ADAM7Q9H2U9 754 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 TACC3Q9Y6A5 838 aa7.27□□□□□ -1.25
LRCH3-211ENST00000466054 N4BP3O15049 544 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 EPHB3P54753 998 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 PSMD2Q13200 908 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 SLC14A2Q15849 920 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 CLEC16AQ2KHT3 1053 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 TTBK2Q6IQ55 1244 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 CNKSR3Q6P9H4 555 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 SYT8Q8NBV8 401 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 PALD1Q9ULE6 856 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 AK5Q9Y6K8 562 aa7.26□□□□□ -1.25
LRCH3-211ENST00000466054 HRKO00198 91 aa7.25□□□□□ -1.25
LRCH3-211ENST00000466054 DNAJB8Q8NHS0 232 aa7.25□□□□□ -1.25
LRCH3-211ENST00000466054 C12orf49Q9H741 205 aa7.25□□□□□ -1.25
LRCH3-211ENST00000466054 MRS2Q9HD23 443 aa7.25□□□□□ -1.25
LRCH3-211ENST00000466054 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
LRCH3-211ENST00000466054 TTF2Q9UNY4 1162 aaKnown RBP7.25□□□□□ -1.25
LRCH3-211ENST00000466054 SORBS3O60504 671 aa7.24□□□□□ -1.25
LRCH3-211ENST00000466054 EIF4BP23588 611 aaKnown RBP7.24□□□□□ -1.25
LRCH3-211ENST00000466054 VAMP1P23763 118 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms