RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 NOM1Q5C9Z4 860 aaKnown RBP21.71■■□□□ 1.07
HOXA9-203ENST00000465941 RNF20Q5VTR2 975 aa21.71■■□□□ 1.07
HOXA9-203ENST00000465941 R3HDMLQ9H3Y0 253 aa21.71■■□□□ 1.07
HOXA9-203ENST00000465941 GOPCQ9HD26 462 aa21.71■■□□□ 1.07
HOXA9-203ENST00000465941 TLR2O60603 784 aa21.7■■□□□ 1.06
HOXA9-203ENST00000465941 HSPA8P11142 646 aaKnown RBP21.7■■□□□ 1.06
HOXA9-203ENST00000465941 VCAM1P19320 739 aa21.7■■□□□ 1.06
HOXA9-203ENST00000465941 KIAA1755Q5JYT7 1200 aa21.7■■□□□ 1.06
HOXA9-203ENST00000465941 TTC14Q96N46 770 aa21.7■■□□□ 1.06
HOXA9-203ENST00000465941 PARK7Q99497 189 aaKnown RBP21.7■■□□□ 1.06
HOXA9-203ENST00000465941 TSKSQ9UJT2 592 aa21.7■■□□□ 1.06
HOXA9-203ENST00000465941 PNMA3Q9UL41 463 aa21.7■■□□□ 1.06
HOXA9-203ENST00000465941 LOC285556D6RIA3 1793 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 OSBPP22059 807 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 TSGA10IPQ3SY00 556 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 CCDC178Q5BJE1 867 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 STOX1Q6ZVD7 989 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 IQCA1Q86XH1 822 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 NCOA7Q8NI08 942 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 STX8Q9UNK0 236 aa21.69■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L15C9J2P7 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L13C9JLJ4 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L11C9JVI0 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L18D6R9N7 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L22D6RA61 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L17D6RBQ6 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L19D6RCP7 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L20D6RJB6 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 F5H6K3 240 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 CYP2C8P10632 490 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 KLRC3Q07444 240 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 USP17L24Q0WX57 530 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 CATSPERGQ6ZRH7 1159 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 GMCL1P1Q8NEA9 526 aa21.68■■□□□ 1.06
HOXA9-203ENST00000465941 ASCC2Q9H1I8 757 aaPredicted RBP21.68■■□□□ 1.06
HOXA9-203ENST00000465941 ADGRA2Q96PE1 1338 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 GPR25O00155 361 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 EIF5BO60841 1220 aaKnown RBP21.67■■□□□ 1.06
HOXA9-203ENST00000465941 HSPA4P34932 840 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 LBX1P52954 281 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 RCSD1Q6JBY9 416 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 RALYLQ86SE5 291 aaKnown RBP21.67■■□□□ 1.06
HOXA9-203ENST00000465941 DGKHQ86XP1 1220 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 SPICE1Q8N0Z3 855 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 KCNB2Q92953 911 aa21.67■■□□□ 1.06
HOXA9-203ENST00000465941 ZSCAN10Q96SZ4 725 aaPredicted RBP21.67■■□□□ 1.06
HOXA9-203ENST00000465941 RPAP3Q9H6T3 665 aaPredicted RBP21.67■■□□□ 1.06
HOXA9-203ENST00000465941 WDR46O15213 610 aaKnown RBP21.66■■□□□ 1.06
HOXA9-203ENST00000465941 IRX3P78415 501 aaPredicted RBP21.66■■□□□ 1.06
HOXA9-203ENST00000465941 C17orf99Q6UX52 265 aa21.66■■□□□ 1.06
HOXA9-203ENST00000465941 ANKS1AQ92625 1134 aa21.66■■□□□ 1.06
HOXA9-203ENST00000465941 ZKSCAN3Q9BRR0 538 aa21.66■■□□□ 1.06
HOXA9-203ENST00000465941 USP26Q9BXU7 913 aa21.66■■□□□ 1.06
HOXA9-203ENST00000465941 NDUFB10O96000 172 aa21.65■■□□□ 1.06
HOXA9-203ENST00000465941 TOP1P11387 765 aaKnown RBP21.65■■□□□ 1.06
HOXA9-203ENST00000465941 ZKSCAN1P17029 563 aaPredicted RBP21.65■■□□□ 1.06
HOXA9-203ENST00000465941 CYB5R4Q7L1T6 521 aa21.65■■□□□ 1.06
HOXA9-203ENST00000465941 RASEFQ8IZ41 740 aa21.65■■□□□ 1.06
HOXA9-203ENST00000465941 LRRC47Q8N1G4 583 aaKnown RBP21.65■■□□□ 1.06
HOXA9-203ENST00000465941 SMCR8Q8TEV9 937 aaPredicted RBP21.65■■□□□ 1.06
HOXA9-203ENST00000465941 P2RX7Q99572 595 aaKnown RBP21.65■■□□□ 1.06
HOXA9-203ENST00000465941 TMEM47Q9BQJ4 181 aa21.65■■□□□ 1.06
HOXA9-203ENST00000465941 UBAC1Q9BSL1 405 aa21.65■■□□□ 1.06
HOXA9-203ENST00000465941 GCLCP48506 637 aaPredicted RBP21.64■■□□□ 1.05
HOXA9-203ENST00000465941 MB21D2Q8IYB1 491 aaPredicted RBP21.64■■□□□ 1.05
HOXA9-203ENST00000465941 ENAHQ8N8S7 591 aaPredicted RBP21.64■■□□□ 1.05
HOXA9-203ENST00000465941 PRDM10Q9NQV6 1147 aa21.64■■□□□ 1.05
HOXA9-203ENST00000465941 TNKSO95271 1327 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 RAD21O60216 631 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 KRT32Q14532 448 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 COG2Q14746 738 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 SLFN13Q68D06 897 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 ZNF296Q8WUU4 475 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-203ENST00000465941 GMCL1Q96IK5 515 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 MTA3Q9BTC8 594 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 TANGO6Q9C0B7 1094 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 HOXC10Q9NYD6 342 aa21.63■■□□□ 1.05
HOXA9-203ENST00000465941 FKTNO75072 461 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 BCRP11274 1271 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 HERVK_113P62684 666 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 SP3Q02447 781 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 SEC23AQ15436 765 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 FAM83BQ5T0W9 1011 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 LBX2Q6XYB7 198 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 GTF3C2Q8WUA4 911 aaPredicted RBP21.62■■□□□ 1.05
HOXA9-203ENST00000465941 CPA4Q9UI42 421 aa21.62■■□□□ 1.05
HOXA9-203ENST00000465941 MCM5P33992 734 aa21.61■■□□□ 1.05
HOXA9-203ENST00000465941 ANTXR2P58335 489 aa21.61■■□□□ 1.05
HOXA9-203ENST00000465941 NEK1Q96PY6 1258 aa21.61■■□□□ 1.05
HOXA9-203ENST00000465941 MYPNQ86TC9 1320 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 BMP3P12645 472 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 MCCP23508 829 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 SART3Q15020 963 aaKnown RBP21.6■■□□□ 1.05
HOXA9-203ENST00000465941 C8orf34Q49A92 452 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 CHST3Q7LGC8 479 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 ANKRD13CQ8N6S4 541 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 IGDCC4Q8TDY8 1250 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 NUP88Q99567 741 aaPredicted RBP21.6■■□□□ 1.05
HOXA9-203ENST00000465941 SNX14Q9Y5W7 946 aa21.6■■□□□ 1.05
HOXA9-203ENST00000465941 ERICH2A1L162 156 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms