RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 RAD50Q92878 1312 aa30.76■■■□□ 2.52
SMC4-206ENST00000465903 ORC4O43929 436 aa30.76■■■□□ 2.51
SMC4-206ENST00000465903 HERVK_113P62684 666 aa30.76■■■□□ 2.51
SMC4-206ENST00000465903 FAM110CQ1W6H9 321 aa30.76■■■□□ 2.51
SMC4-206ENST00000465903 RPAP3Q9H6T3 665 aaPredicted RBP30.76■■■□□ 2.51
SMC4-206ENST00000465903 SH2D4AQ9H788 454 aa30.76■■■□□ 2.51
SMC4-206ENST00000465903 PSMC4P43686 418 aa30.75■■■□□ 2.51
SMC4-206ENST00000465903 CEP95Q96GE4 821 aa30.75■■■□□ 2.51
SMC4-206ENST00000465903 TRIM47Q96LD4 638 aa30.75■■■□□ 2.51
SMC4-206ENST00000465903 MTMR4Q9NYA4 1195 aa30.75■■■□□ 2.51
SMC4-206ENST00000465903 PTPN22Q9Y2R2 807 aa30.75■■■□□ 2.51
SMC4-206ENST00000465903 PEX10O60683 326 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 TSPY3P0CV98 308 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 TSPY8P0CW00 308 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 ARHGEF6Q15052 776 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 IFFO2Q5TF58 517 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 RUFY2Q8WXA3 655 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 LPAR1Q92633 364 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 RBPJLQ9UBG7 517 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 MORF4L1Q9UBU8 362 aa30.74■■■□□ 2.51
SMC4-206ENST00000465903 BMP2KLQ5H9B9 411 aa30.73■■■□□ 2.51
SMC4-206ENST00000465903 SPICE1Q8N0Z3 855 aa30.73■■■□□ 2.51
SMC4-206ENST00000465903 MKL1Q969V6 931 aa30.73■■■□□ 2.51
SMC4-206ENST00000465903 TXNRD2Q9NNW7 524 aa30.73■■■□□ 2.51
SMC4-206ENST00000465903 PPP4R2Q9NY27 417 aa30.73■■■□□ 2.51
SMC4-206ENST00000465903 SGSM2O43147 1006 aa30.72■■■□□ 2.51
SMC4-206ENST00000465903 TBC1D10CQ8IV04 446 aa30.72■■■□□ 2.51
SMC4-206ENST00000465903 NKX2-3Q8TAU0 364 aa30.72■■■□□ 2.51
SMC4-206ENST00000465903 CLIP2Q9UDT6 1046 aa30.72■■■□□ 2.51
SMC4-206ENST00000465903 HPS5Q9UPZ3 1129 aa30.72■■■□□ 2.51
SMC4-206ENST00000465903 RANBP6O60518 1105 aaKnown RBP30.71■■■□□ 2.51
SMC4-206ENST00000465903 GNRH1P01148 92 aa30.71■■■□□ 2.51
SMC4-206ENST00000465903 AKNAD1Q5T1N1 836 aa30.71■■■□□ 2.51
SMC4-206ENST00000465903 IL17RBQ9NRM6 502 aa30.71■■■□□ 2.51
SMC4-206ENST00000465903 TSPY2A6NKD2 308 aa30.7■■■□□ 2.51
SMC4-206ENST00000465903 ZNF213O14771 459 aa30.7■■■□□ 2.51
SMC4-206ENST00000465903 FMNL1O95466 1100 aaPredicted RBP30.7■■■□□ 2.51
SMC4-206ENST00000465903 PTH1RQ03431 593 aa30.7■■■□□ 2.51
SMC4-206ENST00000465903 Q3C1V9 767 aa30.7■■■□□ 2.51
SMC4-206ENST00000465903 STAG1Q8WVM7 1258 aa30.7■■■□□ 2.51
SMC4-206ENST00000465903 SPDYE16A6NNV3 312 aaPredicted RBP30.69■■■□□ 2.5
SMC4-206ENST00000465903 WDR46O15213 610 aaKnown RBP30.69■■■□□ 2.5
SMC4-206ENST00000465903 CNMDO75829 334 aa30.69■■■□□ 2.5
SMC4-206ENST00000465903 FCGRTP55899 365 aa30.69■■■□□ 2.5
SMC4-206ENST00000465903 LBX2Q6XYB7 198 aa30.69■■■□□ 2.5
SMC4-206ENST00000465903 GOPCQ9HD26 462 aa30.69■■■□□ 2.5
SMC4-206ENST00000465903 F5H6K3 240 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 NMT2O60551 498 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 TTLL1O95922 423 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 KLRC3Q07444 240 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 COG2Q14746 738 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 RRP12Q5JTH9 1297 aaKnown RBP30.68■■■□□ 2.5
SMC4-206ENST00000465903 MFSD6Q6ZSS7 791 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 GTF3C2Q8WUA4 911 aaPredicted RBP30.68■■■□□ 2.5
SMC4-206ENST00000465903 TOMM22Q9NS69 142 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 SRRDQ9UH36 339 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 CTNNA3Q9UI47 895 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 HTTP42858 3142 aa30.68■■■□□ 2.5
SMC4-206ENST00000465903 PCP11498 1178 aaKnown RBP30.67■■■□□ 2.5
SMC4-206ENST00000465903 NOVP48745 357 aa30.67■■■□□ 2.5
SMC4-206ENST00000465903 GPRC5AQ8NFJ5 357 aa30.67■■■□□ 2.5
SMC4-206ENST00000465903 TANGO6Q9C0B7 1094 aa30.67■■■□□ 2.5
SMC4-206ENST00000465903 PTCH2Q9Y6C5 1203 aa30.67■■■□□ 2.5
SMC4-206ENST00000465903 COL11A1P12107 1806 aaPredicted RBP30.67■■■□□ 2.5
SMC4-206ENST00000465903 PLXNB2O15031 1838 aa30.66■■■□□ 2.5
SMC4-206ENST00000465903 PAGR1Q9BTK6 254 aa30.66■■■□□ 2.5
SMC4-206ENST00000465903 HOXC10Q9NYD6 342 aa30.66■■■□□ 2.5
SMC4-206ENST00000465903 RABGAP1Q9Y3P9 1069 aa30.66■■■□□ 2.5
SMC4-206ENST00000465903 A0A0G2JMZ2 1700 aa30.66■■■□□ 2.5
SMC4-206ENST00000465903 NEDD4P46934 1319 aa30.66■■■□□ 2.5
SMC4-206ENST00000465903 NDUFB10O96000 172 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 HOXD10P28358 340 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 DSG3P32926 999 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 PRMT2P55345 433 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 ERVK-9P63128 1117 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 ERVK-24P63145 666 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 IMMTQ16891 758 aaKnown RBP30.65■■■□□ 2.5
SMC4-206ENST00000465903 LRRC47Q8N1G4 583 aaKnown RBP30.65■■■□□ 2.5
SMC4-206ENST00000465903 RNF41Q9H4P4 317 aaPredicted RBP30.65■■■□□ 2.5
SMC4-206ENST00000465903 BTBD7Q9P203 1132 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 SYNPO2Q9UMS6 1093 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 GABRQQ9UN88 632 aa30.65■■■□□ 2.5
SMC4-206ENST00000465903 RAD21O60216 631 aa30.64■■■□□ 2.5
SMC4-206ENST00000465903 CAPN15O75808 1086 aa30.64■■■□□ 2.5
SMC4-206ENST00000465903 FAM83BQ5T0W9 1011 aa30.64■■■□□ 2.5
SMC4-206ENST00000465903 NUP88Q99567 741 aaPredicted RBP30.64■■■□□ 2.5
SMC4-206ENST00000465903 TCP11L1Q9NUJ3 509 aa30.64■■■□□ 2.5
SMC4-206ENST00000465903 CCDC85CA6NKD9 419 aa30.63■■■□□ 2.49
SMC4-206ENST00000465903 TNPO2O14787 897 aaKnown RBP30.63■■■□□ 2.49
SMC4-206ENST00000465903 GMCL1P1Q8NEA9 526 aa30.63■■■□□ 2.49
SMC4-206ENST00000465903 ESYT1Q9BSJ8 1104 aa30.63■■■□□ 2.49
SMC4-206ENST00000465903 FBXO28Q9NVF7 368 aa30.63■■■□□ 2.49
SMC4-206ENST00000465903 MYPNQ86TC9 1320 aa30.63■■■□□ 2.49
SMC4-206ENST00000465903 FLOT1O75955 427 aa30.62■■■□□ 2.49
SMC4-206ENST00000465903 PRKCZQ05513 592 aa30.62■■■□□ 2.49
SMC4-206ENST00000465903 MAP4K1Q92918 833 aa30.62■■■□□ 2.49
SMC4-206ENST00000465903 PORCNQ9H237 461 aa30.62■■■□□ 2.49
SMC4-206ENST00000465903 ATG4CQ96DT6 458 aa30.61■■■□□ 2.49
SMC4-206ENST00000465903 ADAMTS5Q9UNA0 930 aa30.61■■■□□ 2.49
SMC4-206ENST00000465903 STX8Q9UNK0 236 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms