RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZC3H4Q9UPT8 1303 aaKnown RBP22.26■■□□□ 1.15
SDF4-205ENST00000465727 MYH6P13533 1939 aa22.25■■□□□ 1.15
SDF4-205ENST00000465727 KRT9P35527 623 aa22.25■■□□□ 1.15
SDF4-205ENST00000465727 CCT6AP40227 531 aaKnown RBP22.25■■□□□ 1.15
SDF4-205ENST00000465727 STRBPQ96SI9 672 aaKnown RBP22.25■■□□□ 1.15
SDF4-205ENST00000465727 ZBTB3Q9H5J0 574 aa22.25■■□□□ 1.15
SDF4-205ENST00000465727 ZNF532Q9HCE3 1301 aa22.25■■□□□ 1.15
SDF4-205ENST00000465727 A0A087X0B3 334 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 COPB1P53618 953 aaKnown RBP22.24■■□□□ 1.15
SDF4-205ENST00000465727 IFIT5Q13325 482 aaKnown RBP22.24■■□□□ 1.15
SDF4-205ENST00000465727 AIDAQ96BJ3 306 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 ORAI2Q96SN7 254 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 PYM1Q9BRP8 204 aaKnown RBP22.24■■□□□ 1.15
SDF4-205ENST00000465727 CRACR2AQ9BSW2 395 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 CABP5Q9NP86 173 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 CTNND2Q9UQB3 1225 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 PATL2C9JE40 543 aaKnown RBP22.24■■□□□ 1.15
SDF4-205ENST00000465727 PDE6AP16499 860 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 XBP1P17861 261 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 SF3B2Q13435 895 aaKnown RBP22.24■■□□□ 1.15
SDF4-205ENST00000465727 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
SDF4-205ENST00000465727 CSF1RP07333 972 aa22.23■■□□□ 1.15
SDF4-205ENST00000465727 PPP2R5BQ15173 497 aa22.23■■□□□ 1.15
SDF4-205ENST00000465727 SYMPKQ92797 1274 aaKnown RBP22.23■■□□□ 1.15
SDF4-205ENST00000465727 NAPBQ9H115 298 aa22.23■■□□□ 1.15
SDF4-205ENST00000465727 TCRBV5S4A2TA0A5A2 114 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 IDH1O75874 414 aaKnown RBP22.22■■□□□ 1.15
SDF4-205ENST00000465727 TRIM28Q13263 835 aaKnown RBP22.22■■□□□ 1.15
SDF4-205ENST00000465727 WTAPQ15007 396 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 TCP11X2Q5H9J9 407 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 IQCEQ6IPM2 695 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 MMS22LQ6ZRQ5 1243 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 FAM76AQ8TAV0 307 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 RUBCNQ92622 972 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 EPSTI1Q96J88 318 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 GUCA1BQ9UMX6 200 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 ALS2Q96Q42 1657 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 ERICH2A1L162 156 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 METTL24Q5JXM2 366 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 OR8K1Q8NGG5 319 aa22.22■■□□□ 1.15
SDF4-205ENST00000465727 PIH1D3Q9NQM4 214 aaKnown RBP22.22■■□□□ 1.15
SDF4-205ENST00000465727 REXO2Q9Y3B8 237 aaKnown RBP22.22■■□□□ 1.15
SDF4-205ENST00000465727 PCCAP05165 728 aaPredicted RBP22.21■■□□□ 1.15
SDF4-205ENST00000465727 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
SDF4-205ENST00000465727 KRT83P78385 493 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 PAK1Q13153 545 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 GBP6Q6ZN66 633 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 MFSD6Q6ZSS7 791 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 KRT28Q7Z3Y7 464 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 SMYD4Q8IYR2 804 aaPredicted RBP22.21■■□□□ 1.15
SDF4-205ENST00000465727 IFNL3Q8IZI9 196 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 OXER1Q8TDS5 423 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 RNF26Q9BY78 433 aaPredicted RBP22.21■■□□□ 1.15
SDF4-205ENST00000465727 RIPOR2Q9Y4F9 1068 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 COL18A1P39060 1754 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 MYH13Q9UKX3 1938 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 ANO9A1A5B4 782 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 KCNJ18B7U540 433 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 KCNJ12Q14500 433 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 SWT1Q5T5J6 900 aaKnown RBP22.21■■□□□ 1.15
SDF4-205ENST00000465727 MMS19Q96T76 1030 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 DNAJC7Q99615 494 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 VPS16Q9H269 839 aa22.21■■□□□ 1.15
SDF4-205ENST00000465727 RNF225M0QZC1 329 aaPredicted RBP22.2■■□□□ 1.14
SDF4-205ENST00000465727 STAG1Q8WVM7 1258 aa22.2■■□□□ 1.14
SDF4-205ENST00000465727 DISP2A7MBM2 1401 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 A0A1W2PQC6 194 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 KRT86O43790 486 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 UQCRFS1P1P0C7P4 283 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 ARID4AP29374 1257 aaPredicted RBP22.19■■□□□ 1.14
SDF4-205ENST00000465727 GGCXP38435 758 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 CCDC70Q6NSX1 233 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 FANCBQ8NB91 859 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 RBM33Q96EV2 1170 aaKnown RBP22.19■■□□□ 1.14
SDF4-205ENST00000465727 SELENOOQ9BVL4 669 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 EPB41L4AQ9HCS5 686 aaPredicted RBP22.19■■□□□ 1.14
SDF4-205ENST00000465727 RMND1Q9NWS8 449 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 GOLGA6CA6NDK9 693 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 A1BGP04217 495 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 ATP1A1P05023 1023 aaKnown RBP22.19■■□□□ 1.14
SDF4-205ENST00000465727 GOLGA6DP0CG33 693 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 PPFIA1Q13136 1202 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 TSR1Q2NL82 804 aaKnown RBP22.19■■□□□ 1.14
SDF4-205ENST00000465727 RRAGBQ5VZM2 374 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 CCNI2Q6ZMN8 369 aaPredicted RBP22.19■■□□□ 1.14
SDF4-205ENST00000465727 CHP1Q99653 195 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 NCAPGQ9BPX3 1015 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 GOLGA6AQ9NYA3 693 aa22.19■■□□□ 1.14
SDF4-205ENST00000465727 PAPPAQ13219 1627 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 A6NNZ2 444 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 EBAG9O00559 213 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 CASP1P29466 404 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 CDC25AP30304 524 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 KRT2P35908 639 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 CTDSPL2Q05D32 466 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 TUBB8Q3ZCM7 444 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 CCDC122Q5T0U0 273 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 CERS3Q8IU89 383 aa22.18■■□□□ 1.14
SDF4-205ENST00000465727 CEP89Q96ST8 783 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms