RNA–Protein interactions for RNA: ENST00000465045.5

PHF11-206, Transcript of PHD finger protein 11, humanhuman

TSL 1 (best)

Gene PHF11, Length 1,626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-206ENST00000465045 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 PARK7Q99497 189 aaKnown RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 NYAP2Q9P242 653 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 MTMR7Q9Y216 660 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 IRX3P78415 501 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 TRDNQ13061 729 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 RALYLQ86SE5 291 aaKnown RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 SMCR8Q8TEV9 937 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 KRT23Q9C075 422 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 TANGO6Q9C0B7 1094 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 ZFYVE28Q9HCC9 887 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
PHF11-206ENST00000465045 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
PHF11-206ENST00000465045 A0A0G2JMZ2 1700 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 NDUFB10O96000 172 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
PHF11-206ENST00000465045 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 CPA4Q9UI42 421 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
PHF11-206ENST00000465045 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
PHF11-206ENST00000465045 TNKSO95271 1327 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 PEX10O60683 326 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.34
PHF11-206ENST00000465045 FAM83BQ5T0W9 1011 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 NCOA7Q8NI08 942 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 LPAR1Q92633 364 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 CFHR5Q9BXR6 569 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 SLC45A1Q9Y2W3 748 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 MGAMO43451 1857 aa12.93□□□□□ -0.34
PHF11-206ENST00000465045 F5H6K3 240 aa12.92□□□□□ -0.34
PHF11-206ENST00000465045 GPR25O00155 361 aa12.92□□□□□ -0.34
PHF11-206ENST00000465045 TLR2O60603 784 aa12.92□□□□□ -0.34
PHF11-206ENST00000465045 OSBPP22059 807 aa12.92□□□□□ -0.34
PHF11-206ENST00000465045 KLRC3Q07444 240 aa12.92□□□□□ -0.34
PHF11-206ENST00000465045 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
PHF11-206ENST00000465045 ENAHQ8N8S7 591 aaPredicted RBP12.92□□□□□ -0.34
PHF11-206ENST00000465045 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
PHF11-206ENST00000465045 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
PHF11-206ENST00000465045 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
PHF11-206ENST00000465045 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 WDR46O15213 610 aaKnown RBP12.91□□□□□ -0.34
PHF11-206ENST00000465045 HOXA7P31268 230 aaPredicted RBP12.91□□□□□ -0.34
PHF11-206ENST00000465045 HSPA4P34932 840 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 NOVP48745 357 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 ANTXR2P58335 489 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 HERVK_113P62684 666 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 ADCK5Q3MIX3 580 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 C8orf34Q49A92 452 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 MKL1Q969V6 931 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
PHF11-206ENST00000465045 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 FBXO28Q9NVF7 368 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 HTTP42858 3142 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 FLOT1O75955 427 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 SEC24BO95487 1268 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
PHF11-206ENST00000465045 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 SLFN13Q68D06 897 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 CATSPERGQ6ZRH7 1159 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
PHF11-206ENST00000465045 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
PHF11-206ENST00000465045 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
PHF11-206ENST00000465045 MCCP23508 829 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 CAP1Q01518 475 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 C17orf99Q6UX52 265 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 CD99L2Q8TCZ2 262 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
PHF11-206ENST00000465045 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
PHF11-206ENST00000465045 SYNPO2Q9UMS6 1093 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms