RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TOMM22Q9NS69 142 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 HPS5Q9UPZ3 1129 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 PTPN22Q9Y2R2 807 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.21■□□□□ 0.83
VPS52-215ENST00000464425 IGKV6D-41A0A0C4DH26 115 aa20.2■□□□□ 0.82
VPS52-215ENST00000464425 RANBP6O60518 1105 aaKnown RBP20.2■□□□□ 0.82
VPS52-215ENST00000464425 NEDD1Q8NHV4 660 aa20.2■□□□□ 0.82
VPS52-215ENST00000464425 CEP95Q96GE4 821 aa20.2■□□□□ 0.82
VPS52-215ENST00000464425 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
VPS52-215ENST00000464425 ZMYM6O95789 1325 aa20.2■□□□□ 0.82
VPS52-215ENST00000464425 FCGRTP55899 365 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 FAM110CQ1W6H9 321 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 RRP12Q5JTH9 1297 aaKnown RBP20.19■□□□□ 0.82
VPS52-215ENST00000464425 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 LPAR1Q92633 364 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 PAGR1Q9BTK6 254 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 DSCC1Q9BVC3 393 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 TANGO6Q9C0B7 1094 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 TXNRD2Q9NNW7 524 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 MTMR4Q9NYA4 1195 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 NYAP2Q9P242 653 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 RBPJLQ9UBG7 517 aa20.19■□□□□ 0.82
VPS52-215ENST00000464425 TSPY2A6NKD2 308 aa20.18■□□□□ 0.82
VPS52-215ENST00000464425 ZNF213O14771 459 aa20.18■□□□□ 0.82
VPS52-215ENST00000464425 POTEEQ6S8J3 1075 aa20.18■□□□□ 0.82
VPS52-215ENST00000464425 NBPF3Q9H094 633 aa20.18■□□□□ 0.82
VPS52-215ENST00000464425 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
VPS52-215ENST00000464425 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
VPS52-215ENST00000464425 ORC4O43929 436 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 NMT2O60551 498 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 GNRH1P01148 92 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 FGRP09769 529 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 MFSD6Q6ZSS7 791 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 GPRC5AQ8NFJ5 357 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 PTCH2Q9Y6C5 1203 aa20.17■□□□□ 0.82
VPS52-215ENST00000464425 TNPO2O14787 897 aaKnown RBP20.16■□□□□ 0.82
VPS52-215ENST00000464425 TTLL1O95922 423 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 HOXD10P28358 340 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 COG2Q14746 738 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 Q3C1V9 767 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 AKNAD1Q5T1N1 836 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
VPS52-215ENST00000464425 LRRC47Q8N1G4 583 aaKnown RBP20.16■□□□□ 0.82
VPS52-215ENST00000464425 MORF4L1Q9UBU8 362 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 SRRDQ9UH36 339 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 RAD50Q92878 1312 aa20.16■□□□□ 0.82
VPS52-215ENST00000464425 SPDYE16A6NNV3 312 aaPredicted RBP20.15■□□□□ 0.82
VPS52-215ENST00000464425 F5H6K3 240 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
VPS52-215ENST00000464425 SGSM2O43147 1006 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 FLOT1O75955 427 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 KLRC3Q07444 240 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
VPS52-215ENST00000464425 MKL1Q969V6 931 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 NUP88Q99567 741 aaPredicted RBP20.15■□□□□ 0.82
VPS52-215ENST00000464425 IL17RBQ9NRM6 502 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 HOXC10Q9NYD6 342 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 PLIN4Q96Q06 1357 aa20.15■□□□□ 0.82
VPS52-215ENST00000464425 GREB1LQ9C091 1923 aaPredicted RBP20.15■□□□□ 0.82
VPS52-215ENST00000464425 MYPNQ86TC9 1320 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 CNMDO75829 334 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 NDUFB10O96000 172 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 ERVK-24P63145 666 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 PTH1RQ03431 593 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 PRKCZQ05513 592 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
VPS52-215ENST00000464425 FAM83BQ5T0W9 1011 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 NKX2-3Q8TAU0 364 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 STAG1Q8WVM7 1258 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 CHMP4CQ96CF2 233 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.81
VPS52-215ENST00000464425 GABRQQ9UN88 632 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 STX8Q9UNK0 236 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 RABGAP1Q9Y3P9 1069 aa20.14■□□□□ 0.81
VPS52-215ENST00000464425 COA7Q96BR5 231 aa20.13■□□□□ 0.81
VPS52-215ENST00000464425 FBXO28Q9NVF7 368 aa20.13■□□□□ 0.81
VPS52-215ENST00000464425 BTBD7Q9P203 1132 aa20.13■□□□□ 0.81
VPS52-215ENST00000464425 NEDD4P46934 1319 aa20.12■□□□□ 0.81
VPS52-215ENST00000464425 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
VPS52-215ENST00000464425 DSG3P32926 999 aa20.12■□□□□ 0.81
VPS52-215ENST00000464425 PRMT2P55345 433 aa20.12■□□□□ 0.81
VPS52-215ENST00000464425 LBX2Q6XYB7 198 aa20.12■□□□□ 0.81
VPS52-215ENST00000464425 CCAR1Q8IX12 1150 aaKnown RBP20.12■□□□□ 0.81
VPS52-215ENST00000464425 RAET1EQ8TD07 263 aa20.12■□□□□ 0.81
VPS52-215ENST00000464425 PORCNQ9H237 461 aa20.12■□□□□ 0.81
VPS52-215ENST00000464425 HTTP42858 3142 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 CDC45O75419 566 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 FLT3LGP49771 235 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 SLC9C1Q4G0N8 1177 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 PPP4R3BQ5MIZ7 849 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 SLFN13Q68D06 897 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 CASC1Q6TDU7 716 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 ATG4CQ96DT6 458 aa20.11■□□□□ 0.81
VPS52-215ENST00000464425 KIAA1211Q6ZU35 1233 aa20.1■□□□□ 0.81
VPS52-215ENST00000464425 GMCL1P1Q8NEA9 526 aa20.1■□□□□ 0.81
VPS52-215ENST00000464425 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
VPS52-215ENST00000464425 ESR2Q92731 530 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms