RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NCOA7Q8NI08 942 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 SUCLG2Q96I99 432 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 TCEANC2Q96MN5 208 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 PURBQ96QR8 312 aaKnown RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 OCSTAMPQ9BR26 566 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 FUT8Q9BYC5 575 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 PARD6BQ9BYG5 372 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 BICC1Q9H694 974 aaKnown RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 HMX1Q9NP08 348 aaPredicted RBP8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 RSPH14Q9UHP6 348 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 ADAM21Q9UKJ8 722 aa8.18□□□□□ -1.1
CLSTN1-204ENST00000464286 SIPA1L3O60292 1781 aaPredicted RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CTAGE15A4D2H0 777 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 AKR1B15C9JRZ8 316 aaPredicted RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 E7EWF7 191 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 BMP15O95972 392 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CTAGE8P0CG41 777 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 GTF2A1P52655 376 aaPredicted RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CKAP4Q07065 602 aaKnown RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 SPAG1Q07617 926 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 TBX2Q13207 712 aaPredicted RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 GCKRQ14397 625 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 ZMYM1Q5SVZ6 1142 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CTAGE6Q86UF2 777 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CTAGE4Q8IX94 777 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 ABTB2Q8N961 1025 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CNNM3Q8NE01 707 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 DDX54Q8TDD1 881 aaKnown RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 METTL22Q9BUU2 404 aaPredicted RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 PAG1Q9NWQ8 432 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 PA2G4Q9UQ80 394 aaKnown RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 HPSEQ9Y251 543 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 WDR17Q8IZU2 1322 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 ZNF609O15014 1411 aa8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 MARF1Q9Y4F3 1742 aaKnown RBP8.17□□□□□ -1.1
CLSTN1-204ENST00000464286 VWA3AA6NCI4 1184 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 NEURL1BA8MQ27 555 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 RNMTO43148 476 aaKnown RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 CTDNEP1O95476 244 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 IL15P40933 162 aaPredicted RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 AFDNP55196 1824 aaKnown RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 SCARF1Q14162 830 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 RABL6Q3YEC7 729 aaPredicted RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 DNAJC21Q5F1R6 531 aaKnown RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 RESP18Q5W5W9 173 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 GBP6Q6ZN66 633 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 CCDC91Q7Z6B0 441 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 TMTC1Q8IUR5 882 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 PDILTQ8N807 584 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 PCMTD1Q96MG8 357 aaPredicted RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 SIL1Q9H173 461 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 STK36Q9NRP7 1315 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 DBNLQ9UJU6 430 aaKnown RBP8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 ADAMTS7Q9UKP4 1686 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 AKAP2Q9Y2D5 859 aa8.16□□□□□ -1.1
CLSTN1-204ENST00000464286 KIF1AQ12756 1690 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 TMEM94Q12767 1356 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 ZMYM6O95789 1325 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 ITIH6Q6UXX5 1313 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 A0A087WUV0 522 aaPredicted RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 TARSL2A2RTX5 802 aaKnown RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 PPFIA4O75335 1185 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 CIAO1O76071 339 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 CCT2P78371 535 aaKnown RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 KIF23Q02241 960 aaPredicted RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 SEMA3FQ13275 785 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 TTC39AQ5SRH9 613 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 AXDND1Q5T1B0 1012 aaPredicted RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 WDR93Q6P2C0 686 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 TMEM87BQ96K49 555 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 NAPGQ99747 312 aaPredicted RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 VPS18Q9P253 973 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 KCNH3Q9ULD8 1083 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.1
CLSTN1-204ENST00000464286 KLF18A0A0U1RQI7 1052 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 BIN1O00499 593 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 CLSTN1O94985 981 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 CPP00450 1065 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 HSPD1P10809 573 aaKnown RBP8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 AARSP49588 968 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 PLCD1P51178 756 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 PTK2Q05397 1052 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 RILPL1Q5EBL4 403 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 BEND6Q5SZJ8 279 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms