RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 GOLGA6L19H0YKK7 550 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 MYL1P05976 194 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 USP17L8P0C7I0 530 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 CDR1P51861 262 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 ZBED6P86452 979 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 CEBPZQ03701 1054 aaKnown RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 PLA2G2CQ5R387 149 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 GET4Q7L5D6 327 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SPATA21Q7Z572 469 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 PLA2G4DQ86XP0 818 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 LMBR1Q8WVP7 490 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 TBC1D5Q92609 795 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC114Q96M63 670 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 DNAJC25Q9H1X3 360 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 RTEL1Q9NZ71 1219 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 IQCA1LA6NCM1 817 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 EIF4E1BA6NMX2 242 aaKnown RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 EFCAB8A8MWE9 144 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 PER1O15534 1290 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 GPR37L1O60883 481 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 PDHBP11177 359 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 PPP2R1AP30153 589 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 PRPHP41219 470 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 MRPL12P52815 198 aaKnown RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CTDSPL2Q05D32 466 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC15Q0P6D6 951 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 FLIIQ13045 1269 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 MAP3K11Q16584 847 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 AMOTQ4VCS5 1084 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC93Q567U6 631 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC178Q5BJE1 867 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 RRP12Q5JTH9 1297 aaKnown RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 RNF187Q5TA31 235 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 ZKSCAN2Q63HK3 967 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 TMC6Q7Z403 805 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 PLEKHG4BQ96PX9 1271 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 NUDT12Q9BQG2 462 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 TRIM4Q9C037 500 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 PHACTR1Q9C0D0 580 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 C1orf115Q9H7X2 142 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 A1CFQ9NQ94 594 aaKnown RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 BTG4Q9NY30 223 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 DDX20Q9UHI6 824 aaKnown RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 IL16Q14005 1332 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 IGSF1Q8N6C5 1336 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CDHR2Q9BYE9 1310 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 WDR33Q9C0J8 1336 aaKnown RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 TMEM265A0A087WTH1 108 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 LGR5O75473 907 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 ZNF165P49910 485 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CCZ1BP86790 482 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CCZ1P86791 482 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 CEP112Q8N8E3 955 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 AFAP1L1Q8TED9 768 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 NUP62CLQ9H1M0 184 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 MMADHCQ9H3L0 296 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-205ENST00000463753 KLC4Q9NSK0 619 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 TPCN1Q9ULQ1 816 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 GPSM3Q9Y4H4 160 aa4.1□□□□□ -1.75
COL8A1-205ENST00000463753 SHTN1A0MZ66 631 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 APBB1O00213 710 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ZEB2O60315 1214 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 NEMFO60524 1076 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 HMMRO75330 724 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ATP6V1G1O75348 118 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ZNF189O75820 626 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 IMPDH2P12268 514 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 WNT7BP56706 349 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 PPP2R3AQ06190 1150 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 DDR1Q08345 913 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 TMEM62Q0P6H9 643 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 GNPTABQ3T906 1256 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 CAPRIN2Q6IMN6 1127 aaKnown RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 HDXQ7Z353 690 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 GPR161Q8N6U8 529 aaKnown RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 MTMR14Q8NCE2 650 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 BCAS4Q8TDM0 211 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 SMARCC1Q92922 1105 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 TBC1D31Q96DN5 1066 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 RSRC1Q96IZ7 334 aaKnown RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 EHD4Q9H223 541 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 TNMDQ9H2S6 317 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 TBC1D2BQ9UPU7 963 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 TJP1Q07157 1748 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ANKRD50Q9ULJ7 1429 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 GOLGA6L4A6NEF3 574 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 BECN2A8MW95 431 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ZSCAN9O15535 394 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 UPP2O95045 317 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 RTN3O95197 1032 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 CSB-PGBD3P0DP91 1061 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 NEFHP12036 1026 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 CD151P48509 253 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 MECOMQ03112 1051 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 SETDB1Q15047 1291 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 LRRFIP1Q32MZ4 808 aaKnown RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 LRRC23Q53EV4 343 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms