RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 CLIP2Q9UDT6 1046 aa11.82□□□□□ -0.52
GPATCH4-204ENST00000463513 TMX2Q9Y320 296 aa11.82□□□□□ -0.52
GPATCH4-204ENST00000463513 A0A1W2PRG0 241 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 FGRP09769 529 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 CYP2C8P10632 490 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 ZKSCAN1P17029 563 aaPredicted RBP11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 SART3Q15020 963 aaKnown RBP11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 CCDC178Q5BJE1 867 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 NCOA7Q8NI08 942 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 C12orf42Q96LP6 360 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 RPAP3Q9H6T3 665 aaPredicted RBP11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 MTMR7Q9Y216 660 aa11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 COL11A1P12107 1806 aaPredicted RBP11.81□□□□□ -0.52
GPATCH4-204ENST00000463513 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 ERICH2A1L162 156 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 GPR25O00155 361 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 SLC27A2O14975 620 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 WDR46O15213 610 aaKnown RBP11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 NMT2O60551 498 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 MCCP23508 829 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 KIF22Q14807 665 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 ZKSCAN3Q9BRR0 538 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 CFHR5Q9BXR6 569 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 SYNPO2Q9UMS6 1093 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 A0A0G2JMZ2 1700 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 MYH6P13533 1939 aa11.8□□□□□ -0.52
GPATCH4-204ENST00000463513 ZSWIM8A7E2V4 1837 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 E7EWF7 191 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 TLR2O60603 784 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 FKTNO75072 461 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 FLOT1O75955 427 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 NDUFB10O96000 172 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 TOP1P11387 765 aaKnown RBP11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 GCLCP48506 637 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 IKQ13123 557 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 KAT14Q9H8E8 782 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 CWC22Q9HCG8 908 aaKnown RBP11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 TNKSO95271 1327 aa11.79□□□□□ -0.52
GPATCH4-204ENST00000463513 RLFQ13129 1914 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 F5H6K3 240 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 HERVK_113P62684 666 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 SP3Q02447 781 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 KLRC3Q07444 240 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 KRT32Q14532 448 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 ARHGEF6Q15052 776 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 ZNF296Q8WUU4 475 aaPredicted RBP11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 CHMP4CQ96CF2 233 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 ZSCAN10Q96SZ4 725 aaPredicted RBP11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 PAGR1Q9BTK6 254 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 R3HDMLQ9H3Y0 253 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 PRDM10Q9NQV6 1147 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 IL17RBQ9NRM6 502 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 TCP11L1Q9NUJ3 509 aa11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 CTDP1Q9Y5B0 961 aaPredicted RBP11.78□□□□□ -0.52
GPATCH4-204ENST00000463513 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 SLC1A4P43007 532 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 IFIT1BQ5T764 474 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 CATSPERGQ6ZRH7 1159 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 STOX1Q6ZVD7 989 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 MKL1Q969V6 931 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 TTC14Q96N46 770 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 NUP88Q99567 741 aaPredicted RBP11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 ADGRA2Q96PE1 1338 aa11.77□□□□□ -0.53
GPATCH4-204ENST00000463513 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 BMP3P12645 472 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 MCM5P33992 734 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 FGD1P98174 961 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 COG2Q14746 738 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 WTAPQ15007 396 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 NECTIN1Q15223 517 aa11.76□□□□□ -0.53
GPATCH4-204ENST00000463513 FAM110CQ1W6H9 321 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms