RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 KLRC3Q07444 240 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 SSRP1Q08945 709 aaKnown RBP8.61□□□□□ -1.03
EPHA4-210ENST00000463446 TRIM29Q14134 588 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 RTN1Q16799 776 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 SLC4A8Q2Y0W8 1093 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 LDLRAD1Q5T700 205 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 MAP1SQ66K74 1059 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-210ENST00000463446 MCTP2Q6DN12 878 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 APOA5Q6Q788 366 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 CYB5R4Q7L1T6 521 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 ZNF713Q8N859 430 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-210ENST00000463446 FAM184AQ8NB25 1140 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-210ENST00000463446 GTF3C2Q8WUA4 911 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-210ENST00000463446 GMCL1Q96IK5 515 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 TMX3Q96JJ7 454 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 NMRK2Q9NPI5 230 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
EPHA4-210ENST00000463446 FEM1BQ9UK73 627 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 SMC3Q9UQE7 1217 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 ATP6V1DQ9Y5K8 247 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 ZHX2Q9Y6X8 837 aa8.61□□□□□ -1.03
EPHA4-210ENST00000463446 ECM29Q5VYK3 1845 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 GOLGA8AA7E2F4 631 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 GOLGA8BA8MQT2 603 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 CELF2O95319 508 aaKnown RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 ITGBL1O95965 494 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 ZBTB48P10074 688 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 CETPP11597 493 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 BMP3P12645 472 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 BACE1P56817 501 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 APOBRQ0VD83 1088 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 TROAPQ12815 778 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 SNAPC2Q13487 334 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 CUL4AQ13619 759 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 TOB2Q14106 344 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 SEPT2Q15019 361 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 SLFN13Q68D06 897 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 GALNT17Q6IS24 598 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 CHST3Q7LGC8 479 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 SAMD3Q8N6K7 520 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 PRPF38AQ8NAV1 312 aaKnown RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 NUP133Q8WUM0 1156 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 ZKSCAN3Q9BRR0 538 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 GLIS2Q9BZE0 524 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-210ENST00000463446 VCPKMTQ9H867 229 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 INCENPQ9NQS7 918 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 TPCN1Q9ULQ1 816 aa8.6□□□□□ -1.03
EPHA4-210ENST00000463446 FOCADQ5VW36 1801 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 ADM5C9JUS6 153 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 WDR46O15213 610 aaKnown RBP8.59□□□□□ -1.03
EPHA4-210ENST00000463446 RAD21O60216 631 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 IFNAR1P17181 557 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 OSBPP22059 807 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 ECE1P42892 770 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 ANTXR2P58335 489 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 NUCB2P80303 420 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 PPIL2Q13356 520 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
EPHA4-210ENST00000463446 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 SLC44A5Q8NCS7 719 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
EPHA4-210ENST00000463446 RNF26Q9BY78 433 aaPredicted RBP8.59□□□□□ -1.03
EPHA4-210ENST00000463446 DNAJC18Q9H819 358 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 ZNF408Q9H9D4 720 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 BRMS1Q9HCU9 246 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 ZCCHC17Q9NP64 241 aaKnown RBP8.59□□□□□ -1.03
EPHA4-210ENST00000463446 SH3GLB2Q9NR46 395 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 CIZ1Q9ULV3 898 aaPredicted RBP8.59□□□□□ -1.03
EPHA4-210ENST00000463446 SLC45A1Q9Y2W3 748 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.03
EPHA4-210ENST00000463446 ASTN2O75129 1339 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 MYPNQ86TC9 1320 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 PALM3A6NDB9 673 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L15C9J2P7 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L13C9JLJ4 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L11C9JVI0 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 KLRF2D3W0D1 207 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L18D6R9N7 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L22D6RA61 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L17D6RBQ6 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L19D6RCP7 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L20D6RJB6 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 PRPF3O43395 683 aaKnown RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 ZBED4O75132 1171 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 GDF11O95390 407 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 DEXIO95424 95 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 SNHG28P0DPA3 235 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 CALML3P27482 149 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 STAT2P52630 851 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 USP17L24Q0WX57 530 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 SPP2Q13103 211 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 IKQ13123 557 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 COG2Q14746 738 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms