RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 STRBPQ96SI9 672 aaKnown RBP26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 APBA2Q99767 749 aa26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 CRISPLD2Q9H0B8 497 aa26.58■■□□□ 1.85
PDLIM7-206ENST00000463411 HOXC10Q9NYD6 342 aa26.58■■□□□ 1.85
PDLIM7-206ENST00000463411 IVNS1ABPQ9Y6Y0 642 aa26.58■■□□□ 1.85
PDLIM7-206ENST00000463411 A0A0G2JMZ2 1700 aa26.58■■□□□ 1.85
PDLIM7-206ENST00000463411 TRIM32Q13049 653 aa26.57■■□□□ 1.84
PDLIM7-206ENST00000463411 COG2Q14746 738 aa26.57■■□□□ 1.84
PDLIM7-206ENST00000463411 MORN1Q5T089 497 aa26.57■■□□□ 1.84
PDLIM7-206ENST00000463411 GIMAP6Q6P9H5 292 aa26.57■■□□□ 1.84
PDLIM7-206ENST00000463411 CLEC10AQ8IUN9 316 aa26.57■■□□□ 1.84
PDLIM7-206ENST00000463411 TMX2Q9Y320 296 aa26.57■■□□□ 1.84
PDLIM7-206ENST00000463411 H0YGN5 161 aa26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 PRKAR2AP13861 404 aaKnown RBP26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 GNAT2P19087 354 aa26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 MAP2K5Q13163 448 aa26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 USP6NLQ92738 828 aa26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 OSBP2Q969R2 916 aa26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 BTBD7Q9P203 1132 aa26.56■■□□□ 1.84
PDLIM7-206ENST00000463411 GPAA1O43292 621 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 ATP2B2Q01814 1243 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 SBK1Q52WX2 424 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 ANKLE1Q8NAG6 615 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 CRBNQ96SW2 442 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 VCPKMTQ9H867 229 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 KANSL2Q9H9L4 492 aa26.55■■□□□ 1.84
PDLIM7-206ENST00000463411 SLC15A5A6NIM6 579 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 SMIM22K7EJ46 135 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 TDO2P48775 406 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 HABP4Q5JVS0 413 aaKnown RBP26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 MB21D1Q8N884 522 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 FSD1Q9BTV5 496 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 NR2E3Q9Y5X4 410 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 ROBO3Q96MS0 1386 aa26.54■■□□□ 1.84
PDLIM7-206ENST00000463411 RLFQ13129 1914 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 GSG1L2A8MUP6 293 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 WDR46O15213 610 aaKnown RBP26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 FLOT1O75955 427 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 MX1P20591 662 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 PTPREP23469 700 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 MAP3K21Q5TCX8 1036 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 SPICE1Q8N0Z3 855 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 PI4K2BQ8TCG2 481 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 MKNK2Q9HBH9 465 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 GOPCQ9HD26 462 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 PARP14Q460N5 1801 aa26.53■■□□□ 1.84
PDLIM7-206ENST00000463411 MINDY4BA8MYZ0 360 aa26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 APPP05067 770 aa26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 EEF2P13639 858 aaKnown RBP26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 NECAB2Q7Z6G3 386 aa26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 SIAH1Q8IUQ4 282 aa26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 GREB1LQ9C091 1923 aaPredicted RBP26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 ZNF236Q9UL36 1845 aa26.52■■□□□ 1.84
PDLIM7-206ENST00000463411 M0R2C6 588 aa26.51■■□□□ 1.83
PDLIM7-206ENST00000463411 CCL14Q16627 93 aa26.51■■□□□ 1.83
PDLIM7-206ENST00000463411 KIAA1755Q5JYT7 1200 aa26.51■■□□□ 1.83
PDLIM7-206ENST00000463411 OTUD7AQ8TE49 926 aaPredicted RBP26.51■■□□□ 1.83
PDLIM7-206ENST00000463411 PAWRQ96IZ0 340 aaKnown RBP26.51■■□□□ 1.83
PDLIM7-206ENST00000463411 ZNF287Q9HBT7 754 aa26.51■■□□□ 1.83
PDLIM7-206ENST00000463411 DSG3P32926 999 aa26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 CACNB2Q08289 660 aaPredicted RBP26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 GRB14Q14449 540 aa26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 MFSD14CQ5VZR4 134 aa26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 SHCBP1Q8NEM2 672 aa26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 NACAP1Q9BZK3 213 aa26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 SPATC1LQ9H0A9 340 aa26.5■■□□□ 1.83
PDLIM7-206ENST00000463411 RAD21O60216 631 aa26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 EVI5O60447 810 aa26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 PLS1Q14651 629 aa26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 ANKRD45Q5TZF3 282 aa26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 SAMD1Q6SPF0 538 aaPredicted RBP26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 STK11IPQ8N1F8 1099 aa26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 MOV10L1Q9BXT6 1211 aaKnown RBP26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 EPB41L4AQ9HCS5 686 aaPredicted RBP26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 COLQQ9Y215 455 aaPredicted RBP26.49■■□□□ 1.83
PDLIM7-206ENST00000463411 RASA1P20936 1047 aa26.48■■□□□ 1.83
PDLIM7-206ENST00000463411 DIS3LQ8TF46 1054 aaKnown RBP26.48■■□□□ 1.83
PDLIM7-206ENST00000463411 ATG4CQ96DT6 458 aa26.48■■□□□ 1.83
PDLIM7-206ENST00000463411 OGDHLQ9ULD0 1010 aa26.48■■□□□ 1.83
PDLIM7-206ENST00000463411 CEP290O15078 2479 aa26.48■■□□□ 1.83
PDLIM7-206ENST00000463411 STRNO43815 780 aa26.47■■□□□ 1.83
PDLIM7-206ENST00000463411 HOXC6P09630 235 aa26.47■■□□□ 1.83
PDLIM7-206ENST00000463411 NBPF3Q9H094 633 aa26.47■■□□□ 1.83
PDLIM7-206ENST00000463411 COL11A1P12107 1806 aaPredicted RBP26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 FRMPD3Q5JV73 1810 aa26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 PATL2C9JE40 543 aaKnown RBP26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 ERCC3P19447 782 aa26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 CCND3P30281 292 aaPredicted RBP26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 HDAC1Q13547 482 aaPredicted RBP26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 AAMPQ13685 434 aa26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 DPP9Q86TI2 863 aa26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 MROH8Q9H579 483 aa26.46■■□□□ 1.83
PDLIM7-206ENST00000463411 ALPK3Q96L96 1907 aa26.45■■□□□ 1.83
PDLIM7-206ENST00000463411 CHRDL2Q6WN34 429 aa26.45■■□□□ 1.82
PDLIM7-206ENST00000463411 NCAPG2Q86XI2 1143 aa26.45■■□□□ 1.82
PDLIM7-206ENST00000463411 IFNL3Q8IZI9 196 aa26.45■■□□□ 1.82
PDLIM7-206ENST00000463411 ZNF444Q8N0Y2 327 aaPredicted RBP26.45■■□□□ 1.82
PDLIM7-206ENST00000463411 C11orf49Q9H6J7 331 aa26.45■■□□□ 1.82
PDLIM7-206ENST00000463411 SLC5A4Q9NY91 659 aa26.45■■□□□ 1.82
PDLIM7-206ENST00000463411 MYH4Q9Y623 1939 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms