RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PRPF3O43395 683 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 DDAH1O94760 285 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 IPO7O95373 1038 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 GYPCP04921 128 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 RHOXF2BP0C7M4 288 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 PCP11498 1178 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 FGFR2P21802 821 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CYP7A1P22680 504 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CASP14P31944 242 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ACTN2P35609 894 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 IGHMBP2P38935 993 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CCT6AP40227 531 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TNNT3P45378 269 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TRAPPC10P48553 1259 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 COPB1P53618 953 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 STX17P56962 302 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ST5P78524 1137 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 GRIN1Q05586 938 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 PPARAQ07869 468 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 DPYDQ12882 1025 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 NR5A1Q13285 461 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 IRF5Q13568 498 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 RASGRF1Q13972 1273 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 KCNJ12Q14500 433 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 MCM6Q14566 821 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 KRT31Q15323 416 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TTC38Q5R3I4 469 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 BEND6Q5SZJ8 279 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 IFIT1BQ5T764 474 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TMCO4Q5TGY1 634 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 RRAGBQ5VZM2 374 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC70Q6NSX1 233 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 SLC35F6Q8N357 371 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 LCORLQ8N3X6 602 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ACRBPQ8NEB7 543 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CTCFLQ8NI51 663 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 OXER1Q8TDS5 423 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 NOC3LQ8WTT2 800 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 NELFBQ8WX92 580 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 DDX17Q92841 729 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC102AQ96A19 550 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC47Q96A33 483 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 RPGRIP1Q96KN7 1286 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 NUP88Q99567 741 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 RHOXF2Q9BQY4 288 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ZKSCAN3Q9BRR0 538 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 PHF20Q9BVI0 1012 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 EPC1Q9H2F5 836 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 PDE11AQ9HCR9 933 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ABHD10Q9NUJ1 306 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 GNL3LQ9NVN8 582 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TMEM51Q9NW97 253 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ZNHIT6Q9NWK9 470 aaKnown RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 VPS54Q9P1Q0 977 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 LRP2BPQ9P2M1 347 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 MAGEC2Q9UBF1 373 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ANAPC4Q9UJX5 808 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 PKD1L3Q7Z443 1732 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 LAMB4A4D0S4 1761 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ARFGEF2Q9Y6D5 1785 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TNKSO95271 1327 aa3.96□□□□□ -1.77
COL8A1-204ENST00000462604 LRP5O75197 1615 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 LRP6O75581 1613 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 TIAM2Q8IVF5 1701 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 A0A087X0B3 334 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 A0A1W2PQC6 194 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 TARSL2A2RTX5 802 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 LGALS16A8MUM7 142 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 UBE2Q2LH0YL09 131 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 PSMD14O00487 310 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 PRKAB2O43741 272 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 RPS6KA5O75582 802 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 RPN1P04843 607 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CD44P16070 742 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CAPN2P17655 700 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 BRD2P25440 801 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CALML3P27482 149 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 GTF2E1P29083 439 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 KIF5BP33176 963 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 KRT9P35527 623 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CYLC1P35663 651 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 LONP1P36776 959 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 STAT6P42226 847 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 FXR1P51114 621 aaKnown RBP eCLIP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 EVA1CP58658 441 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 NLRP5P59047 1200 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 VSNL1P62760 191 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 KRT83P78385 493 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ATP2C1P98194 919 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 UBXN1Q04323 297 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 SEMA3FQ13275 785 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CASP8Q14790 479 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF174Q15697 407 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC152Q4G0S7 254 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 TCP11X2Q5H9J9 407 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF658Q5TYW1 1059 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 WWC2Q6AWC2 1192 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 WDR93Q6P2C0 686 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CTR9Q6PD62 1173 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms