RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TROAPQ12815 778 aa15.77■□□□□ 0.12
PBRM1-219ENST00000462207 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.12
PBRM1-219ENST00000462207 CATIPQ7Z7H3 387 aa15.77■□□□□ 0.12
PBRM1-219ENST00000462207 ZNF274Q96GC6 653 aaPredicted RBP15.77■□□□□ 0.12
PBRM1-219ENST00000462207 SLKQ9H2G2 1235 aaPredicted RBP15.77■□□□□ 0.12
PBRM1-219ENST00000462207 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
PBRM1-219ENST00000462207 CSADQ9Y600 493 aa15.77■□□□□ 0.12
PBRM1-219ENST00000462207 PHIPQ8WWQ0 1821 aa15.77■□□□□ 0.12
PBRM1-219ENST00000462207 GOLGA8AA7E2F4 631 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 PFKFB2O60825 505 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 DGKZQ13574 1117 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 BECN1Q14457 450 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 SMC1BQ8NDV3 1235 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
PBRM1-219ENST00000462207 PASKQ96RG2 1323 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 RAD21O60216 631 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 PPFIA3O75145 1194 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 DDAH1O94760 285 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 CDC27P30260 824 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.11
PBRM1-219ENST00000462207 KIAA1755Q5JYT7 1200 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 LDLRAD1Q5T700 205 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 SYNE3Q6ZMZ3 975 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 MKL1Q969V6 931 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 SH2B1Q9NRF2 756 aaPredicted RBP15.76■□□□□ 0.11
PBRM1-219ENST00000462207 FAM217BQ9NTX9 383 aaPredicted RBP15.76■□□□□ 0.11
PBRM1-219ENST00000462207 GINM1Q9NU53 330 aa15.76■□□□□ 0.11
PBRM1-219ENST00000462207 TOMM70O94826 608 aa15.75■□□□□ 0.11
PBRM1-219ENST00000462207 PPP4R3BQ5MIZ7 849 aa15.75■□□□□ 0.11
PBRM1-219ENST00000462207 ZHX2Q9Y6X8 837 aa15.75■□□□□ 0.11
PBRM1-219ENST00000462207 NID2Q14112 1375 aa15.75■□□□□ 0.11
PBRM1-219ENST00000462207 TRIM75PA6NK02 468 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 NDUFB10O96000 172 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 PDHBP11177 359 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 RTN1Q16799 776 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 SPICE1Q8N0Z3 855 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 RBM46Q8TBY0 533 aaKnown RBP15.74■□□□□ 0.11
PBRM1-219ENST00000462207 FEZ1Q99689 392 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 TMX2Q9Y320 296 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 FRMPD2Q68DX3 1309 aaPredicted RBP15.74■□□□□ 0.11
PBRM1-219ENST00000462207 GOLGA8HP0CJ92 632 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 ADD1P35611 737 aaKnown RBP15.74■□□□□ 0.11
PBRM1-219ENST00000462207 SPP2Q13103 211 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 MTMR2Q13614 643 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 CUL4AQ13619 759 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 USP17L2Q6R6M4 530 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 CMTR1Q8N1G2 835 aaKnown RBP15.74■□□□□ 0.11
PBRM1-219ENST00000462207 STAG2Q8N3U4 1231 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 C2orf69Q8N8R5 385 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 FANCBQ8NB91 859 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 OTUD5Q96G74 571 aa15.74■□□□□ 0.11
PBRM1-219ENST00000462207 NUP88Q99567 741 aaPredicted RBP15.74■□□□□ 0.11
PBRM1-219ENST00000462207 F5H6K3 240 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 PLEKHA8P1O95397 391 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 CTDNEP1O95476 244 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 FKBP1BP68106 108 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 KLRC3Q07444 240 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 GRM4Q14833 912 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 SLFN13Q68D06 897 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
PBRM1-219ENST00000462207 SPDYE5A6NIY4 337 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 CALM1P0DP23 149 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 CALM2P0DP24 149 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 CALM3P0DP25 149 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 CCDC96Q2M329 555 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 ZNF280CQ8ND82 737 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
PBRM1-219ENST00000462207 IPO9Q96P70 1041 aaKnown RBP15.72■□□□□ 0.11
PBRM1-219ENST00000462207 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 VCPKMTQ9H867 229 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 AS3MTQ9HBK9 375 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 MAD2L2Q9UI95 211 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 AFG3L2Q9Y4W6 797 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 JAK2O60674 1132 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 GJA5P36382 358 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 RCAN1P53805 252 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 ERO1BQ86YB8 467 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 KIAA1683Q9H0B3 1180 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 SH2D4AQ9H788 454 aa15.72■□□□□ 0.11
PBRM1-219ENST00000462207 ISY1Q9ULR0 285 aaKnown RBP15.72■□□□□ 0.11
PBRM1-219ENST00000462207 USP17L10C9JJH3 530 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 SLC35G1Q2M3R5 365 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 TMTC3Q6ZXV5 915 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 KCTD1Q719H9 257 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 NBPF11Q86T75 865 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 NSUN7Q8NE18 718 aaKnown RBP15.71■□□□□ 0.11
PBRM1-219ENST00000462207 GOPCQ9HD26 462 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
PBRM1-219ENST00000462207 EMILIN3Q9NT22 766 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms