RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 RIMBP2O15034 1052 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 TLR2O60603 784 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 HNRNPH1P31943 449 aaKnown RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 PEX19P40855 299 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 CHRNDQ07001 517 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 IFIT5Q13325 482 aaKnown RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 CFAP100Q494V2 611 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 EFCAB13Q8IY85 973 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 CTCFLQ8NI51 663 aaPredicted RBP6.75□□□□□ -1.33
CLK1-207ENST00000461981 CCDC26Q8TAB7 109 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 KCNB2Q92953 911 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 VEZTQ9HBM0 779 aa6.75□□□□□ -1.33
CLK1-207ENST00000461981 UBE2Q2LH0YL09 131 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 ERLIN2O94905 339 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 GJB1P08034 283 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 ITGA6P23229 1130 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 NAP1L1P55209 391 aaKnown RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 ATP2B2Q01814 1243 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 AIMP1Q12904 312 aaKnown RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 WWC2Q6AWC2 1192 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 C17orf99Q6UX52 265 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 LRRC31Q6UY01 552 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 TEX11Q8IYF3 940 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 KLHL23Q8NBE8 558 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 ZNF483Q8TF39 744 aaPredicted RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 FAM151AQ8WW52 585 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 PARK7Q99497 189 aaKnown RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 CRISPLD2Q9H0B8 497 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 SEC31BQ9NQW1 1179 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 ARGLU1Q9NWB6 273 aaPredicted RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 ANGEL1Q9UNK9 670 aaKnown RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 ZNF232Q9UNY5 417 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 KIF2AO00139 706 aaPredicted RBP6.74□□□□□ -1.33
CLK1-207ENST00000461981 SASH3O75995 380 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 PABPC4Q13310 644 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLK1-207ENST00000461981 KCNV1Q6PIU1 500 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 KIRREL3Q8IZU9 778 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 IQUBQ8NA54 791 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 PARD3BQ8TEW8 1205 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 EXOC4Q96A65 974 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 GOPCQ9HD26 462 aa6.74□□□□□ -1.33
CLK1-207ENST00000461981 A0A0G2JMZ2 1700 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 TPD52L2O43399 206 aaKnown RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 ZRANB2O95218 330 aaKnown RBP eCLIP6.73□□□□□ -1.33
CLK1-207ENST00000461981 CPP00450 1065 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 GCKP35557 465 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 GJA8P48165 433 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 FLIIQ13045 1269 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 BEND3Q5T5X7 828 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 ZSCAN25Q6NSZ9 544 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 IDI2Q9BXS1 227 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 GREM2Q9H772 168 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 SUDS3Q9H7L9 328 aaPredicted RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 VPS18Q9P253 973 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 SRRDQ9UH36 339 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 FRMPD3Q5JV73 1810 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 SHTN1A0MZ66 631 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 FAM163BP0C2L3 166 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 ABCD1P33897 745 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 GCLCP48506 637 aaPredicted RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 SCRN1Q12765 414 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 NEDD9Q14511 834 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 ALDH1L2Q3SY69 923 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 RNF20Q5VTR2 975 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 ACRBPQ8NEB7 543 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 SH3GL3Q99963 347 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 SPATS2LQ9NUQ6 558 aaKnown RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 ROBO3Q96MS0 1386 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 ZBTB7BO15156 539 aaPredicted RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 EGFRP00533 1210 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 GCFC2P16383 781 aaKnown RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 HIBADHP31937 336 aaKnown RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 USP8P40818 1118 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 TWISTNBQ3B726 338 aaPredicted RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 PROCA1Q8NCQ7 364 aaPredicted RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 ZBTB10Q96DT7 871 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 OTUD5Q96G74 571 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 LNPKQ9C0E8 428 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 OSBPL5Q9H0X9 879 aaPredicted RBP6.73□□□□□ -1.33
CLK1-207ENST00000461981 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 RMI1Q9H9A7 625 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 KIF9Q9HAQ2 790 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 PNMA3Q9UL41 463 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 TRIM17Q9Y577 477 aa6.73□□□□□ -1.33
CLK1-207ENST00000461981 ATAD5Q96QE3 1844 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 GAKO14976 1311 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLK1-207ENST00000461981 PYGLP06737 847 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 BCRP11274 1271 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 ERCC3P19447 782 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 FGFR2P21802 821 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 FCGRTP55899 365 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 SOX10P56693 466 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
CLK1-207ENST00000461981 TEKT1Q969V4 418 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms