RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
SYN3-206ENST00000461446 MGAMO43451 1857 aa12.04□□□□□ -0.48
SYN3-206ENST00000461446 TNPO2O14787 897 aaKnown RBP12.03□□□□□ -0.48
SYN3-206ENST00000461446 FGRP09769 529 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 EN2P19622 333 aaPredicted RBP12.03□□□□□ -0.48
SYN3-206ENST00000461446 FLT3LGP49771 235 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 PRMT2P55345 433 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 HAND2P61296 217 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 HERVK_113P62684 666 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 PDE4BQ07343 736 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
SYN3-206ENST00000461446 NBPF11Q86T75 865 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 SIAH1Q8IUQ4 282 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 KIAA1683Q9H0B3 1180 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 RBPJLQ9UBG7 517 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 RBM8AQ9Y5S9 174 aaKnown RBP12.03□□□□□ -0.48
SYN3-206ENST00000461446 TACC3Q9Y6A5 838 aa12.03□□□□□ -0.48
SYN3-206ENST00000461446 PRDM1O75626 825 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 REC8O95072 547 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 PCP11498 1178 aaKnown RBP12.02□□□□□ -0.49
SYN3-206ENST00000461446 VCAM1P19320 739 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 RASA1P20936 1047 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 GRK4P32298 578 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 MTFR1Q15390 333 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 TMEM179Q6ZVK1 233 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
SYN3-206ENST00000461446 STAG1Q8WVM7 1258 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 NBPF3Q9H094 633 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 INCENPQ9NQS7 918 aa12.02□□□□□ -0.49
SYN3-206ENST00000461446 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYN3-206ENST00000461446 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 ORC4O43929 436 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 CYP21A2P08686 494 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 ELNP15502 786 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP14P54578 494 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 Q3C1V9 767 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 CATSPERGQ6ZRH7 1159 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 MFSD6Q6ZSS7 791 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 TBC1D10CQ8IV04 446 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 PAGR1Q9BTK6 254 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 RNF41Q9H4P4 317 aaPredicted RBP12.01□□□□□ -0.49
SYN3-206ENST00000461446 RPAP3Q9H6T3 665 aaPredicted RBP12.01□□□□□ -0.49
SYN3-206ENST00000461446 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 MORF4L1Q9UBU8 362 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 BIN2Q9UBW5 565 aaPredicted RBP12.01□□□□□ -0.49
SYN3-206ENST00000461446 BRCA2P51587 3418 aa12.01□□□□□ -0.49
SYN3-206ENST00000461446 EPB41L2O43491 1005 aaKnown RBP12□□□□□ -0.49
SYN3-206ENST00000461446 ADCY3O60266 1144 aa12□□□□□ -0.49
SYN3-206ENST00000461446 ICA1Q05084 483 aa12□□□□□ -0.49
SYN3-206ENST00000461446 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
SYN3-206ENST00000461446 GPRC5AQ8NFJ5 357 aa12□□□□□ -0.49
SYN3-206ENST00000461446 COA7Q96BR5 231 aa12□□□□□ -0.49
SYN3-206ENST00000461446 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
SYN3-206ENST00000461446 PORCNQ9H237 461 aa12□□□□□ -0.49
SYN3-206ENST00000461446 GJD2Q9UKL4 321 aa12□□□□□ -0.49
SYN3-206ENST00000461446 MYH8P13535 1937 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 SLC27A2O14975 620 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 RANBP6O60518 1105 aaKnown RBP11.99□□□□□ -0.49
SYN3-206ENST00000461446 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
SYN3-206ENST00000461446 CNMDO75829 334 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 EEF2P13639 858 aaKnown RBP11.99□□□□□ -0.49
SYN3-206ENST00000461446 NT5C2P49902 561 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 ERVK-9P63128 1117 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 ERVK-24P63145 666 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 TFAP4Q01664 338 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 ATP2B2Q01814 1243 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 FAM47AQ5JRC9 791 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 NEDD1Q8NHV4 660 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 TOMM22Q9NS69 142 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
SYN3-206ENST00000461446 NEDD4P46934 1319 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 TSPY2A6NKD2 308 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
SYN3-206ENST00000461446 E7EWF7 191 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 TSPY3P0CV98 308 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 TSPY8P0CW00 308 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 CCL5P13501 91 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 IRF5Q13568 498 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 RRP12Q5JTH9 1297 aaKnown RBP11.98□□□□□ -0.49
SYN3-206ENST00000461446 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 ESR2Q92731 530 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms