RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 MKL1Q969V6 931 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 ZCCHC17Q9NP64 241 aaKnown RBP16.52■□□□□ 0.24
HDLBP-229ENST00000460826 SAGE1Q9NXZ1 904 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
HDLBP-229ENST00000460826 CA12O43570 354 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 SEC24BO95487 1268 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 CYP2C8P10632 490 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 HSPA8P11142 646 aaKnown RBP16.51■□□□□ 0.23
HDLBP-229ENST00000460826 HSPA4P34932 840 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
HDLBP-229ENST00000460826 KCNB2Q92953 911 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 USP26Q9BXU7 913 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
HDLBP-229ENST00000460826 ADGRA2Q96PE1 1338 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 RAD21O60216 631 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 ANTXR2P58335 489 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 TRDNQ13061 729 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 CHST3Q7LGC8 479 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
HDLBP-229ENST00000460826 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-229ENST00000460826 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-229ENST00000460826 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 F5H6K3 240 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 NDUFB10O96000 172 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 HOXA7P31268 230 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-229ENST00000460826 NT5C2P49902 561 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 KLRC3Q07444 240 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 ADCK5Q3MIX3 580 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 TSGA10IPQ3SY00 556 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
HDLBP-229ENST00000460826 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-229ENST00000460826 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-229ENST00000460826 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
HDLBP-229ENST00000460826 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-229ENST00000460826 TNKSO95271 1327 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 EPB41L2O43491 1005 aaKnown RBP16.48■□□□□ 0.23
HDLBP-229ENST00000460826 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
HDLBP-229ENST00000460826 SEC23AQ15436 765 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 ENAHQ8N8S7 591 aaPredicted RBP16.48■□□□□ 0.23
HDLBP-229ENST00000460826 LPAR1Q92633 364 aa16.48■□□□□ 0.23
HDLBP-229ENST00000460826 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
HDLBP-229ENST00000460826 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
HDLBP-229ENST00000460826 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
HDLBP-229ENST00000460826 TLR2O60603 784 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 PEX10O60683 326 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
HDLBP-229ENST00000460826 OSBPP22059 807 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 CTCFP49711 727 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-229ENST00000460826 LBX1P52954 281 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-229ENST00000460826 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 GMCL1P1Q8NEA9 526 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 TTC14Q96N46 770 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 GPHNQ9NQX3 736 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-229ENST00000460826 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 PNMA3Q9UL41 463 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 MTMR7Q9Y216 660 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
HDLBP-229ENST00000460826 DOCK3Q8IZD9 2030 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 MGAMO43451 1857 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 GPR25O00155 361 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 PRC1O43663 620 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
HDLBP-229ENST00000460826 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 FBXO28Q9NVF7 368 aa16.46■□□□□ 0.23
HDLBP-229ENST00000460826 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
HDLBP-229ENST00000460826 IFIT3O14879 490 aaKnown RBP16.45■□□□□ 0.22
HDLBP-229ENST00000460826 BCRP11274 1271 aa16.45■□□□□ 0.22
HDLBP-229ENST00000460826 CPA1P15085 419 aa16.45■□□□□ 0.22
HDLBP-229ENST00000460826 MCCP23508 829 aa16.45■□□□□ 0.22
HDLBP-229ENST00000460826 HERVK_113P62684 666 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms