RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 GSE1Q14687 1217 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 PPP2R5BQ15173 497 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 DEFB115Q30KQ5 88 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 RCSD1Q6JBY9 416 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 NFXL1Q6ZNB6 911 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 MKL1Q969V6 931 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 KIAA1683Q9H0B3 1180 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 PAPPA2Q9BXP8 1791 aa12.92□□□□□ -0.34
SMNDC1-203ENST00000460483 TNKSO95271 1327 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 MANSC4A6NHS7 340 aaPredicted RBP12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 RASSF10A6NK89 507 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 CETPP11597 493 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 SEPT2Q15019 361 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 MB21D2Q8IYB1 491 aaPredicted RBP12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 OPTNQ96CV9 577 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 CEP95Q96GE4 821 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 CLIP2Q9UDT6 1046 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
SMNDC1-203ENST00000460483 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 EEF2P13639 858 aaKnown RBP12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 KIF5BP33176 963 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 NEK4P51957 841 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 RCAN1P53805 252 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 BACE1P56817 501 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 SPP2Q13103 211 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 MYO5AQ9Y4I1 1855 aaKnown RBP12.9□□□□□ -0.34
SMNDC1-203ENST00000460483 NAV1Q8NEY1 1877 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 HSPA6P17066 643 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 GNAQP50148 359 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 MAP3K14Q99558 947 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
SMNDC1-203ENST00000460483 F5H6K3 240 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 RAD21O60216 631 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 DDAH1O94760 285 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 SLC10A3P09131 477 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 MAP2K2P36507 400 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 NOVP48745 357 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 KLRC3Q07444 240 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 TRAF1Q13077 416 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 ADCK5Q3MIX3 580 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 GPATCH4Q5T3I0 446 aaKnown RBP12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 SGMS1Q86VZ5 419 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 DCAF4Q8WV16 495 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
SMNDC1-203ENST00000460483 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 IRF6O14896 467 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 FDX1P10109 184 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 OSBPP22059 807 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 SLC1A4P43007 532 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 MTMR2Q13614 643 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 Q6ZUG5 572 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 GTF3C2Q8WUA4 911 aaPredicted RBP12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
SMNDC1-203ENST00000460483 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms