RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 RNF169Q8NCN4 708 aa11.39□□□□□ -0.59
EPB41-208ENST00000460378 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
EPB41-208ENST00000460378 CDHR1Q96JP9 859 aa11.39□□□□□ -0.59
EPB41-208ENST00000460378 SENP6Q9GZR1 1112 aaPredicted RBP11.39□□□□□ -0.59
EPB41-208ENST00000460378 GNASQ5JWF2 1037 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 FAM160B1Q5W0V3 765 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 FAM205AQ6ZU69 1335 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 PCP11498 1178 aaKnown RBP11.38□□□□□ -0.59
EPB41-208ENST00000460378 CAPN2P17655 700 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 FAM200AQ8TCP9 573 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 FOXN1O15353 648 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 STRNO43815 780 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 CASTP20810 708 aaKnown RBP11.38□□□□□ -0.59
EPB41-208ENST00000460378 Q3C1V9 767 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 ZNF296Q8WUU4 475 aaPredicted RBP11.38□□□□□ -0.59
EPB41-208ENST00000460378 PIK3C2AO00443 1686 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 SLC10A3P09131 477 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 FOXO4P98177 505 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 PDIA6Q15084 440 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 JAKMIP1Q96N16 626 aaKnown RBP11.38□□□□□ -0.59
EPB41-208ENST00000460378 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 RIPOR2Q9Y4F9 1068 aa11.38□□□□□ -0.59
EPB41-208ENST00000460378 PHRF1Q9P1Y6 1649 aaKnown RBP11.37□□□□□ -0.59
EPB41-208ENST00000460378 ZSCAN20P17040 1043 aaPredicted RBP11.37□□□□□ -0.59
EPB41-208ENST00000460378 RTN1Q16799 776 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 CCDC171Q6TFL3 1326 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 MCTP2Q6DN12 878 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 FAM208AQ9UK61 1670 aaKnown RBP11.37□□□□□ -0.59
EPB41-208ENST00000460378 RASSF10A6NK89 507 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 CDK8P49336 464 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 BACE1P56817 501 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 KATNAL1Q9BW62 490 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 HOOK1Q9UJC3 728 aaKnown RBP11.37□□□□□ -0.59
EPB41-208ENST00000460378 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 CAP2P40123 477 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 BFSP2Q13515 415 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 RASAL3Q86YV0 1011 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 CREBRFQ8IUR6 639 aa11.37□□□□□ -0.59
EPB41-208ENST00000460378 RBM28Q9NW13 759 aaKnown RBP11.37□□□□□ -0.59
EPB41-208ENST00000460378 ZBTB43O43298 467 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 ZNF280AP59817 542 aaPredicted RBP11.36□□□□□ -0.59
EPB41-208ENST00000460378 ALG1Q9BT22 464 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 KCNQ5Q9NR82 932 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 AGTPBP1Q9UPW5 1226 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 CCND2P30279 289 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 SYDE2Q5VT97 1194 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 TMEM199Q8N511 208 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 HHIPL1Q96JK4 782 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 TPM2P07951 284 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 FLT3LGP49771 235 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 METAP2P50579 478 aaKnown RBP eCLIP11.36□□□□□ -0.59
EPB41-208ENST00000460378 RNF207Q6ZRF8 634 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 PCDHA1Q9Y5I3 950 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 KIF20BQ96Q89 1820 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 TPD52L1Q16890 204 aaPredicted RBP11.36□□□□□ -0.59
EPB41-208ENST00000460378 TCHPQ9BT92 498 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 AMNQ9BXJ7 453 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
EPB41-208ENST00000460378 CYP2C8P10632 490 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 UTYO14607 1347 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 STXBP2Q15833 593 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 FERMT2Q96AC1 680 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
EPB41-208ENST00000460378 DYNC1LI2O43237 492 aaPredicted RBP11.35□□□□□ -0.59
EPB41-208ENST00000460378 NT5C2P49902 561 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 STK3Q13188 491 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 IFNL3Q8IZI9 196 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 OR6J1Q8NGC5 347 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 IRF6O14896 467 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 HERVK_113P62684 666 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 ATP6V1DQ9Y5K8 247 aa11.35□□□□□ -0.59
EPB41-208ENST00000460378 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 CLMNQ96JQ2 1002 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 MRIQ9BWK5 157 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
EPB41-208ENST00000460378 CSPG5O95196 566 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 GJB1P08034 283 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 CHST13Q8NET6 341 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 CPT1AP50416 773 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 CRHR2Q13324 411 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 ASPRV1Q53RT3 343 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 BICD1Q96G01 975 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 UIMC1Q96RL1 719 aa11.34□□□□□ -0.59
EPB41-208ENST00000460378 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms