RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 GCC1Q96CN9 775 aa25.02■■□□□ 1.6
SRM-202ENST00000459997 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.02■■□□□ 1.6
SRM-202ENST00000459997 BTBD7Q9P203 1132 aa25.02■■□□□ 1.6
SRM-202ENST00000459997 TMX2Q9Y320 296 aa25.02■■□□□ 1.6
SRM-202ENST00000459997 SALL3Q9BXA9 1300 aa25.02■■□□□ 1.6
SRM-202ENST00000459997 MINDY4BA8MYZ0 360 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 TRIM32Q13049 653 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 COG2Q14746 738 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 WDR78Q5VTH9 848 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 SPICE1Q8N0Z3 855 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 STK11IPQ8N1F8 1099 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 LPAR1Q92633 364 aa25.01■■□□□ 1.59
SRM-202ENST00000459997 EPB41L4AQ9HCS5 686 aaPredicted RBP25.01■■□□□ 1.59
SRM-202ENST00000459997 FARP2O94887 1054 aaPredicted RBP25■■□□□ 1.59
SRM-202ENST00000459997 TFRCP02786 760 aaKnown RBP25■■□□□ 1.59
SRM-202ENST00000459997 APPP05067 770 aa25■■□□□ 1.59
SRM-202ENST00000459997 XRCC5P13010 732 aaKnown RBP25■■□□□ 1.59
SRM-202ENST00000459997 TDO2P48775 406 aa25■■□□□ 1.59
SRM-202ENST00000459997 ATP2B2Q01814 1243 aa25■■□□□ 1.59
SRM-202ENST00000459997 MORN1Q5T089 497 aa25■■□□□ 1.59
SRM-202ENST00000459997 UBE2Q1Q7Z7E8 422 aa25■■□□□ 1.59
SRM-202ENST00000459997 USP6NLQ92738 828 aa25■■□□□ 1.59
SRM-202ENST00000459997 SEC62Q99442 399 aaKnown RBP25■■□□□ 1.59
SRM-202ENST00000459997 VCPKMTQ9H867 229 aa25■■□□□ 1.59
SRM-202ENST00000459997 KANSL2Q9H9L4 492 aa25■■□□□ 1.59
SRM-202ENST00000459997 ROBO3Q96MS0 1386 aa25■■□□□ 1.59
SRM-202ENST00000459997 A0A0G2JMZ2 1700 aa24.99■■□□□ 1.59
SRM-202ENST00000459997 EEF2P13639 858 aaKnown RBP24.99■■□□□ 1.59
SRM-202ENST00000459997 RGS2P41220 211 aa24.99■■□□□ 1.59
SRM-202ENST00000459997 HMX1Q9NP08 348 aaPredicted RBP24.99■■□□□ 1.59
SRM-202ENST00000459997 HOXC10Q9NYD6 342 aa24.99■■□□□ 1.59
SRM-202ENST00000459997 RPTORQ8N122 1335 aa24.98■■□□□ 1.59
SRM-202ENST00000459997 ZKSCAN1P17029 563 aaPredicted RBP24.98■■□□□ 1.59
SRM-202ENST00000459997 AAMPQ13685 434 aa24.98■■□□□ 1.59
SRM-202ENST00000459997 TRMT44Q8IYL2 757 aaKnown RBP24.98■■□□□ 1.59
SRM-202ENST00000459997 APBA2Q99767 749 aa24.98■■□□□ 1.59
SRM-202ENST00000459997 MKNK2Q9HBH9 465 aa24.98■■□□□ 1.59
SRM-202ENST00000459997 RLFQ13129 1914 aa24.98■■□□□ 1.59
SRM-202ENST00000459997 GREB1LQ9C091 1923 aaPredicted RBP24.97■■□□□ 1.59
SRM-202ENST00000459997 PATL2C9JE40 543 aaKnown RBP24.97■■□□□ 1.59
SRM-202ENST00000459997 FLOT1O75955 427 aa24.97■■□□□ 1.59
SRM-202ENST00000459997 CAPN2P17655 700 aa24.97■■□□□ 1.59
SRM-202ENST00000459997 RASA1P20936 1047 aa24.97■■□□□ 1.59
SRM-202ENST00000459997 ZMYM1Q5SVZ6 1142 aa24.97■■□□□ 1.59
SRM-202ENST00000459997 CRISPLD2Q9H0B8 497 aa24.97■■□□□ 1.59
SRM-202ENST00000459997 WDR46O15213 610 aaKnown RBP24.96■■□□□ 1.59
SRM-202ENST00000459997 PRKAR2AP13861 404 aaKnown RBP24.96■■□□□ 1.59
SRM-202ENST00000459997 MAP2K5Q13163 448 aa24.96■■□□□ 1.59
SRM-202ENST00000459997 CCL14Q16627 93 aa24.96■■□□□ 1.59
SRM-202ENST00000459997 IFNL3Q8IZI9 196 aa24.96■■□□□ 1.59
SRM-202ENST00000459997 DPF3Q92784 378 aa24.96■■□□□ 1.59
SRM-202ENST00000459997 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.96■■□□□ 1.59
SRM-202ENST00000459997 NACAP1Q9BZK3 213 aa24.96■■□□□ 1.59
SRM-202ENST00000459997 IVNS1ABPQ9Y6Y0 642 aa24.96■■□□□ 1.59
SRM-202ENST00000459997 SLC15A5A6NIM6 579 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 PTPREP23469 700 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 MAP3K21Q5TCX8 1036 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 SAMD1Q6SPF0 538 aaPredicted RBP24.95■■□□□ 1.58
SRM-202ENST00000459997 HTATIP2Q9BUP3 242 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 GOPCQ9HD26 462 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 STAP2Q9UGK3 403 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 PARP14Q460N5 1801 aa24.95■■□□□ 1.58
SRM-202ENST00000459997 RAD21O60216 631 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 DSG3P32926 999 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 PDE1AP54750 535 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 MB21D1Q8N884 522 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 ATG4CQ96DT6 458 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 MOV10L1Q9BXT6 1211 aaKnown RBP24.94■■□□□ 1.58
SRM-202ENST00000459997 SPATC1LQ9H0A9 340 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 ZNF287Q9HBT7 754 aa24.94■■□□□ 1.58
SRM-202ENST00000459997 CACNB2Q08289 660 aaPredicted RBP24.93■■□□□ 1.58
SRM-202ENST00000459997 EVI5LQ96CN4 794 aa24.93■■□□□ 1.58
SRM-202ENST00000459997 H0YGN5 161 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 PRDM1O75626 825 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 SLC34A2O95436 690 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 GRB14Q14449 540 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 PLS1Q14651 629 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 ZNF444Q8N0Y2 327 aaPredicted RBP24.92■■□□□ 1.58
SRM-202ENST00000459997 LNPKQ9C0E8 428 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 NAPBQ9H115 298 aa24.92■■□□□ 1.58
SRM-202ENST00000459997 RWDD1Q9H446 243 aaPredicted RBP24.92■■□□□ 1.58
SRM-202ENST00000459997 CCDC129Q6ZRS4 1044 aa24.91■■□□□ 1.58
SRM-202ENST00000459997 SHCBP1Q8NEM2 672 aa24.91■■□□□ 1.58
SRM-202ENST00000459997 EXOC6Q8TAG9 804 aa24.91■■□□□ 1.58
SRM-202ENST00000459997 NYAP2Q9P242 653 aa24.91■■□□□ 1.58
SRM-202ENST00000459997 ZNF236Q9UL36 1845 aa24.91■■□□□ 1.58
SRM-202ENST00000459997 ERCC3P19447 782 aa24.9■■□□□ 1.58
SRM-202ENST00000459997 FAM83BQ5T0W9 1011 aa24.9■■□□□ 1.58
SRM-202ENST00000459997 B4GALNT3Q6L9W6 998 aa24.9■■□□□ 1.58
SRM-202ENST00000459997 ANKLE1Q8NAG6 615 aa24.9■■□□□ 1.58
SRM-202ENST00000459997 DIS3LQ8TF46 1054 aaKnown RBP24.9■■□□□ 1.58
SRM-202ENST00000459997 PAWRQ96IZ0 340 aaKnown RBP24.9■■□□□ 1.58
SRM-202ENST00000459997 FBXO28Q9NVF7 368 aa24.9■■□□□ 1.58
SRM-202ENST00000459997 FLRT1Q9NZU1 646 aa24.9■■□□□ 1.58
SRM-202ENST00000459997 HOXC6P09630 235 aa24.89■■□□□ 1.58
SRM-202ENST00000459997 SMC5Q8IY18 1101 aa24.89■■□□□ 1.58
SRM-202ENST00000459997 SUPT16HQ9Y5B9 1047 aaKnown RBP24.89■■□□□ 1.58
SRM-202ENST00000459997 COL11A1P12107 1806 aaPredicted RBP24.89■■□□□ 1.57
SRM-202ENST00000459997 IGKV6D-41A0A0C4DH26 115 aa24.88■■□□□ 1.57
SRM-202ENST00000459997 STRNO43815 780 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms