RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
COL18A1-206ENST00000459895 TBC1D8O95759 1140 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 ALDH1A1P00352 501 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 NOVP48745 357 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 C8orf34Q49A92 452 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 OTUD7BQ6GQQ9 843 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 RALYLQ86SE5 291 aaKnown RBP15.14■□□□□ 0.01
COL18A1-206ENST00000459895 MB21D2Q8IYB1 491 aaPredicted RBP15.14■□□□□ 0.01
COL18A1-206ENST00000459895 PARK7Q99497 189 aaKnown RBP15.14■□□□□ 0.01
COL18A1-206ENST00000459895 KRT23Q9C075 422 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 RPAP3Q9H6T3 665 aaPredicted RBP15.14■□□□□ 0.01
COL18A1-206ENST00000459895 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 TNKSO95271 1327 aa15.14■□□□□ 0.01
COL18A1-206ENST00000459895 PLXNB2O15031 1838 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 NDUFB10O96000 172 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 ANTXR2P58335 489 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 RCSD1Q6JBY9 416 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 NUP88Q99567 741 aaPredicted RBP15.13■□□□□ 0.01
COL18A1-206ENST00000459895 GOPCQ9HD26 462 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 CLIP2Q9UDT6 1046 aa15.13■□□□□ 0.01
COL18A1-206ENST00000459895 WDR46O15213 610 aaKnown RBP15.12■□□□□ 0.01
COL18A1-206ENST00000459895 RAD21O60216 631 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 HSPA4P34932 840 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 NT5C2P49902 561 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 ENAHQ8N8S7 591 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-206ENST00000459895 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 LPAR1Q92633 364 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-206ENST00000459895 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 SYNPO2Q9UMS6 1093 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 CASP8AP2Q9UKL3 1982 aa15.12■□□□□ 0.01
COL18A1-206ENST00000459895 ZNF236Q9UL36 1845 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-206ENST00000459895 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-206ENST00000459895 TRDNQ13061 729 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL18A1-206ENST00000459895 ADCK5Q3MIX3 580 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 RNF20Q5VTR2 975 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 GMCL1P1Q8NEA9 526 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 SMCR8Q8TEV9 937 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-206ENST00000459895 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
COL18A1-206ENST00000459895 TMEM47Q9BQJ4 181 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 ZFYVE28Q9HCC9 887 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 ZSWIM5Q9P217 1185 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 CPA4Q9UI42 421 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 HTTP42858 3142 aa15.11■□□□□ 0.01
COL18A1-206ENST00000459895 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
COL18A1-206ENST00000459895 LBX1P52954 281 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 HERVK_113P62684 666 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 PPP4R3BQ5MIZ7 849 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 MKL1Q969V6 931 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 UBAC1Q9BSL1 405 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
COL18A1-206ENST00000459895 SPDYE16A6NNV3 312 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L15C9J2P7 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L13C9JLJ4 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L11C9JVI0 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L18D6R9N7 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L22D6RA61 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L17D6RBQ6 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L19D6RCP7 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L20D6RJB6 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 F5H6K3 240 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 GPR25O00155 361 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 TLR2O60603 784 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 PEX10O60683 326 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 SEC24BO95487 1268 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 BCRP11274 1271 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 TOP1P11387 765 aaKnown RBP15.09■□□□□ 0.01
COL18A1-206ENST00000459895 OSBPP22059 807 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 KLRC3Q07444 240 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 USP17L24Q0WX57 530 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 SEC23AQ15436 765 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 POTEEQ6S8J3 1075 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 KCNB2Q92953 911 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 FBXO28Q9NVF7 368 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 MTMR7Q9Y216 660 aa15.09■□□□□ 0.01
COL18A1-206ENST00000459895 EPB41L2O43491 1005 aaKnown RBP15.08■□□□□ 0
COL18A1-206ENST00000459895 PRC1O43663 620 aa15.08■□□□□ 0
COL18A1-206ENST00000459895 ZKSCAN1P17029 563 aaPredicted RBP15.08■□□□□ 0
COL18A1-206ENST00000459895 CAP1Q01518 475 aa15.08■□□□□ 0
COL18A1-206ENST00000459895 SLFN13Q68D06 897 aa15.08■□□□□ 0
COL18A1-206ENST00000459895 CATSPERGQ6ZRH7 1159 aa15.08■□□□□ 0
COL18A1-206ENST00000459895 ZNF296Q8WUU4 475 aaPredicted RBP15.08■□□□□ 0
COL18A1-206ENST00000459895 GMCL1Q96IK5 515 aa15.08■□□□□ 0
COL18A1-206ENST00000459895 USP26Q9BXU7 913 aa15.08■□□□□ 0
COL18A1-206ENST00000459895 GPHNQ9NQX3 736 aaPredicted RBP15.08■□□□□ 0
COL18A1-206ENST00000459895 SH2B2O14492 632 aaPredicted RBP15.07■□□□□ 0
COL18A1-206ENST00000459895 FLOT1O75955 427 aa15.07■□□□□ 0
COL18A1-206ENST00000459895 CCDC96Q2M329 555 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms