RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 IMMTQ16891 758 aaKnown RBP25.76■■□□□ 1.71
SSNA1-202ENST00000459860 PPP4R3BQ5MIZ7 849 aa25.76■■□□□ 1.71
SSNA1-202ENST00000459860 C17orf99Q6UX52 265 aa25.76■■□□□ 1.71
SSNA1-202ENST00000459860 ASCC2Q9H1I8 757 aaPredicted RBP25.76■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L15C9J2P7 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L13C9JLJ4 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L11C9JVI0 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L18D6R9N7 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L22D6RA61 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L17D6RBQ6 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L19D6RCP7 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L20D6RJB6 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 ORC4O43929 436 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 RANBP6O60518 1105 aaKnown RBP25.75■■□□□ 1.71
SSNA1-202ENST00000459860 GCLCP48506 637 aaPredicted RBP25.75■■□□□ 1.71
SSNA1-202ENST00000459860 USP17L24Q0WX57 530 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 FAM47AQ5JRC9 791 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 RRP12Q5JTH9 1297 aaKnown RBP25.75■■□□□ 1.71
SSNA1-202ENST00000459860 MFSD6Q6ZSS7 791 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 NEDD1Q8NHV4 660 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 LPAR1Q92633 364 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 IL25Q9H293 177 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 GOPCQ9HD26 462 aa25.75■■□□□ 1.71
SSNA1-202ENST00000459860 LACTBP83111 547 aaPredicted RBP25.74■■□□□ 1.71
SSNA1-202ENST00000459860 AKNAD1Q5T1N1 836 aa25.74■■□□□ 1.71
SSNA1-202ENST00000459860 GTF3C2Q8WUA4 911 aaPredicted RBP25.74■■□□□ 1.71
SSNA1-202ENST00000459860 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.74■■□□□ 1.71
SSNA1-202ENST00000459860 VCPKMTQ9H867 229 aa25.74■■□□□ 1.71
SSNA1-202ENST00000459860 NYAP2Q9P242 653 aa25.74■■□□□ 1.71
SSNA1-202ENST00000459860 RAD21O60216 631 aa25.73■■□□□ 1.71
SSNA1-202ENST00000459860 SLC9C1Q4G0N8 1177 aa25.73■■□□□ 1.71
SSNA1-202ENST00000459860 KIAA1211Q6ZU35 1233 aa25.73■■□□□ 1.71
SSNA1-202ENST00000459860 STAG1Q8WVM7 1258 aa25.73■■□□□ 1.71
SSNA1-202ENST00000459860 CEP95Q96GE4 821 aa25.73■■□□□ 1.71
SSNA1-202ENST00000459860 RPAP3Q9H6T3 665 aaPredicted RBP25.73■■□□□ 1.71
SSNA1-202ENST00000459860 MGAMO43451 1857 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 IGKV6D-41A0A0C4DH26 115 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 TTLL1O95922 423 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 FGRP09769 529 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 BCRP11274 1271 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 NT5C2P49902 561 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 SIAH1Q8IUQ4 282 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 TANGO6Q9C0B7 1094 aa25.72■■□□□ 1.71
SSNA1-202ENST00000459860 CDC45O75419 566 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 CTGFP29279 349 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 HERVK_113P62684 666 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 NBPF11Q86T75 865 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 TMEM106CQ9BVX2 250 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 INCENPQ9NQS7 918 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 MTMR4Q9NYA4 1195 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 CLIP2Q9UDT6 1046 aa25.71■■□□□ 1.71
SSNA1-202ENST00000459860 U3KPZ7 1027 aaPredicted RBP25.71■■□□□ 1.71
SSNA1-202ENST00000459860 WDR46O15213 610 aaKnown RBP25.7■■□□□ 1.7
SSNA1-202ENST00000459860 FAM110CQ1W6H9 321 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 CATSPERGQ6ZRH7 1159 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 TBC1D10CQ8IV04 446 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 SPICE1Q8N0Z3 855 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 ANKRD13CQ8N6S4 541 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 ESR2Q92731 530 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 P2RX7Q99572 595 aaKnown RBP25.7■■□□□ 1.7
SSNA1-202ENST00000459860 ESYT1Q9BSJ8 1104 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 SYNPO2Q9UMS6 1093 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 ZSWIM8A7E2V4 1837 aa25.7■■□□□ 1.7
SSNA1-202ENST00000459860 GNRH1P01148 92 aa25.69■■□□□ 1.7
SSNA1-202ENST00000459860 SH3TC2Q8TF17 1288 aa25.69■■□□□ 1.7
SSNA1-202ENST00000459860 NBPF3Q9H094 633 aa25.69■■□□□ 1.7
SSNA1-202ENST00000459860 STX8Q9UNK0 236 aa25.69■■□□□ 1.7
SSNA1-202ENST00000459860 PTH1RQ03431 593 aa25.68■■□□□ 1.7
SSNA1-202ENST00000459860 TACC3Q9Y6A5 838 aa25.68■■□□□ 1.7
SSNA1-202ENST00000459860 RBBP6Q7Z6E9 1792 aaKnown RBP25.68■■□□□ 1.7
SSNA1-202ENST00000459860 FMNL1O95466 1100 aaPredicted RBP25.67■■□□□ 1.7
SSNA1-202ENST00000459860 FCGRTP55899 365 aa25.67■■□□□ 1.7
SSNA1-202ENST00000459860 MKL1Q969V6 931 aa25.67■■□□□ 1.7
SSNA1-202ENST00000459860 CNNM2Q9H8M5 875 aa25.67■■□□□ 1.7
SSNA1-202ENST00000459860 PARP14Q460N5 1801 aa25.67■■□□□ 1.7
SSNA1-202ENST00000459860 NEDD4P46934 1319 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 ECM2O94769 699 aaPredicted RBP25.66■■□□□ 1.7
SSNA1-202ENST00000459860 PSMC4P43686 418 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 PRMT2P55345 433 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 HABP4Q5JVS0 413 aaKnown RBP25.66■■□□□ 1.7
SSNA1-202ENST00000459860 LRRC47Q8N1G4 583 aaKnown RBP25.66■■□□□ 1.7
SSNA1-202ENST00000459860 TRIM47Q96LD4 638 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 PAGR1Q9BTK6 254 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 KRT23Q9C075 422 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 ANO2Q9NQ90 1003 aa25.66■■□□□ 1.7
SSNA1-202ENST00000459860 F5H6K3 240 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 FLOT1O75955 427 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 KLRC3Q07444 240 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 COG2Q14746 738 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 KIAA1755Q5JYT7 1200 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 MAP4K1Q92918 833 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 HOXC10Q9NYD6 342 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 MORF4L1Q9UBU8 362 aa25.65■■□□□ 1.7
SSNA1-202ENST00000459860 KIAA0100Q14667 2235 aaKnown RBP25.64■■□□□ 1.7
SSNA1-202ENST00000459860 MYCP01106 439 aaPredicted RBP25.64■■□□□ 1.7
SSNA1-202ENST00000459860 HOXD10P28358 340 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 TRDNQ13061 729 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 IQCA1Q86XH1 822 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 GMCL1P1Q8NEA9 526 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 GPRC5AQ8NFJ5 357 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 359.2 ms