RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 MIPOL1Q8TD10 442 aa11.95□□□□□ -0.5
AMBRA1-202ENST00000458649 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
AMBRA1-202ENST00000458649 TMOD1P28289 359 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 ERFEQ4G0M1 354 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 NT5C3AQ9H0P0 336 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 AP5M1Q9H0R1 490 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 CCNT1O60563 726 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 FLOT1O75955 427 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 P4HA1P13674 534 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 SCNN1DP51172 638 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 NCAPG2Q86XI2 1143 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 KIAA1524Q8TCG1 905 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 IQCA1LA6NCM1 817 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 OPA1O60313 960 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 YWHAEP62258 255 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 USH1GQ495M9 461 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 ZBTB8OSQ8IWT0 167 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 SEC62Q99442 399 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 NSRP1Q9H0G5 558 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 TMX1Q9H3N1 280 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 FOSP01100 380 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 ALAS1P13196 640 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 DPH6Q7L8W6 267 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
AMBRA1-202ENST00000458649 A0A1B0GVL5 298 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 ATP2A1O14983 1001 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 TUBB4BP68371 445 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 VWA3BQ502W6 1294 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 FAM160B1Q5W0V3 765 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 NCAPH2Q6IBW4 605 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 RASAL2Q9UJF2 1139 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 PTPRMP28827 1452 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 USP17L21D6R901 530 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 ANO1Q5XXA6 986 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 ZNF830Q96NB3 372 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 CSRNP1Q96S65 589 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 LRWD1Q9UFC0 647 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 FEZ2Q9UHY8 353 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 PLEKHG2Q9H7P9 1386 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 ANKS4BQ8N8V4 417 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 MAP4K1Q92918 833 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 GTF3C6Q969F1 213 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 VPS18Q9P253 973 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 JAK2O60674 1132 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 HSPD1P10809 573 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 POLA2Q14181 598 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 UBE3CQ15386 1083 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 FBXO11Q86XK2 927 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 ADPGKQ9BRR6 497 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 NEXMIFQ5QGS0 1516 aa11.93□□□□□ -0.5
AMBRA1-202ENST00000458649 GAS7O60861 476 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 GAS8O95995 478 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 SKILP12757 684 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 ZNF445P59923 1031 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 KRT83P78385 493 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 CTDSPL2Q05D32 466 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 CCDC14Q49A88 953 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 PIK3AP1Q6ZUJ8 805 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 TUBBP07437 444 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 SLC10A4Q96EP9 437 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 GREM2Q9H772 168 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 AXIN2Q9Y2T1 843 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 RABGAP1Q9Y3P9 1069 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 ELP1O95163 1332 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 VWA3AA6NCI4 1184 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 PDE6AP16499 860 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 FERP16591 822 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 ZNF274Q96GC6 653 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 PUS3Q9BZE2 481 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 NACA2Q9H009 215 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 CYP27B1O15528 508 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 CALCRLQ16602 461 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 MIER3Q7Z3K6 550 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 RGS22Q8NE09 1264 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms