RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 TNFRSF25Q93038 417 aa16.07■□□□□ 0.16
SCFD1-203ENST00000458591 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
SCFD1-203ENST00000458591 GYPCP04921 128 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 MCM7P33993 719 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 PBX1P40424 430 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 CDKAL1Q5VV42 579 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 KANK3Q6NY19 840 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 PPFIBP1Q86W92 1011 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
SCFD1-203ENST00000458591 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
SCFD1-203ENST00000458591 CHD4Q14839 1912 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 ZBTB22O15209 634 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 ST5P78524 1137 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 RRAGBQ5VZM2 374 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
SCFD1-203ENST00000458591 CCDC175P0C221 793 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 TAB2Q9NYJ8 693 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 DOCK2Q92608 1830 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 MFAP3LO75121 409 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 ERVK-24P63145 666 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 TMTC3Q6ZXV5 915 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 PLIN2Q99541 437 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 TFCP2L1Q9NZI6 479 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 TFR2Q9UP52 801 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 GDAQ9Y2T3 454 aa16.05■□□□□ 0.16
SCFD1-203ENST00000458591 RTL9Q8NET4 1388 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 CICQ96RK0 1608 aaPredicted RBP16.04■□□□□ 0.16
SCFD1-203ENST00000458591 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 KRT31Q15323 416 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 CELF1Q92879 486 aaKnown RBP16.04■□□□□ 0.16
SCFD1-203ENST00000458591 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
SCFD1-203ENST00000458591 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 TPM1P09493 284 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 XBP1P17861 261 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 OAS2P29728 719 aaKnown RBP16.04■□□□□ 0.16
SCFD1-203ENST00000458591 E2F4Q16254 413 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 NEK11Q8NG66 645 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 GPKOWQ92917 476 aaPredicted RBP eCLIP16.04■□□□□ 0.16
SCFD1-203ENST00000458591 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
SCFD1-203ENST00000458591 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 TRIM49BA6NDI0 452 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 PP2D1A8MPX8 630 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 SIK1P57059 783 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 NLRP5P59047 1200 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 SLC35F6Q8N357 371 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 GPR161Q8N6U8 529 aaKnown RBP16.03■□□□□ 0.16
SCFD1-203ENST00000458591 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 TAF1P21675 1872 aa16.03■□□□□ 0.16
SCFD1-203ENST00000458591 GOLGA6L9A6NEM1 432 aa16.02■□□□□ 0.16
SCFD1-203ENST00000458591 AK7Q96M32 723 aa16.02■□□□□ 0.16
SCFD1-203ENST00000458591 TRIM10Q9UDY6 481 aa16.02■□□□□ 0.16
SCFD1-203ENST00000458591 FAM205AQ6ZU69 1335 aa16.02■□□□□ 0.16
SCFD1-203ENST00000458591 MYH2Q9UKX2 1941 aa16.02■□□□□ 0.16
SCFD1-203ENST00000458591 N4BP3O15049 544 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 KCNQ2O43526 872 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 ATP2C1P98194 919 aaPredicted RBP16.02■□□□□ 0.15
SCFD1-203ENST00000458591 WWC2Q6AWC2 1192 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 PDXDC2PQ6P474 469 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 IQCA1Q86XH1 822 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 GSDMAQ96QA5 445 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 PNKPQ96T60 521 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 CHP1Q99653 195 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 FUT8Q9BYC5 575 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 MINPP1Q9UNW1 487 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 ZNF804BA4D1E1 1349 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 ARAP2Q8WZ64 1704 aa16.02■□□□□ 0.15
SCFD1-203ENST00000458591 BAZ2AQ9UIF9 1905 aaKnown RBP16.01■□□□□ 0.15
SCFD1-203ENST00000458591 PRDX5P30044 214 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 CYP2C19P33261 490 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 MECOMQ03112 1051 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 ANKZF1Q9H8Y5 726 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.01■□□□□ 0.15
SCFD1-203ENST00000458591 RCAN1P53805 252 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
SCFD1-203ENST00000458591 SMC1AQ14683 1233 aaKnown RBP16.01■□□□□ 0.15
SCFD1-203ENST00000458591 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 STAG2Q8N3U4 1231 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 SLF1Q9BQI6 1058 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 MTA3Q9BTC8 594 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 UBXN6Q9BZV1 441 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 CALCOCO1Q9P1Z2 691 aa16.01■□□□□ 0.15
SCFD1-203ENST00000458591 H3BQF6 201 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 RHOXF2BP0C7M4 288 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 CHMP4BP1P59074 171 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms