RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 KIAA1683Q9H0B3 1180 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 SYNPO2Q9UMS6 1093 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 CXCL11O14625 94 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 BACE1P56817 501 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 DGKZQ13574 1117 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 ZYXQ15942 572 aaKnown RBP19.77■□□□□ 0.76
TRIM39-211ENST00000458516 SH3D19Q5HYK7 790 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 Q6ZUG5 572 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 FBXL16Q8N461 479 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 CCDC102AQ96A19 550 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 SH2D4AQ9H788 454 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 PDRG1Q9NUG6 133 aa19.77■□□□□ 0.76
TRIM39-211ENST00000458516 A0A0G2JLL6 359 aaPredicted RBP19.76■□□□□ 0.75
TRIM39-211ENST00000458516 LIFRP42702 1097 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 HMGCS2P54868 508 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 TOB2Q14106 344 aaPredicted RBP19.76■□□□□ 0.75
TRIM39-211ENST00000458516 RABEP1Q15276 862 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 KIAA1755Q5JYT7 1200 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 PAXIP1Q6ZW49 1069 aaPredicted RBP19.76■□□□□ 0.75
TRIM39-211ENST00000458516 PRRT2Q7Z6L0 340 aaPredicted RBP19.76■□□□□ 0.75
TRIM39-211ENST00000458516 MS4A4AQ96JQ5 239 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 VCPKMTQ9H867 229 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 EMILIN3Q9NT22 766 aa19.76■□□□□ 0.75
TRIM39-211ENST00000458516 C19orf81C9J6K1 198 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 NEK4P51957 841 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 USP14P54578 494 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 SNAPC2Q13487 334 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 MOGSQ13724 837 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 USP17L2Q6R6M4 530 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 SGMS1Q86VZ5 419 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 PNMA1Q8ND90 353 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 GMCL1P1Q8NEA9 526 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 CAPNS2Q96L46 248 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 C12orf42Q96LP6 360 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 ALDH8A1Q9H2A2 487 aaPredicted RBP19.75■□□□□ 0.75
TRIM39-211ENST00000458516 KAT14Q9H8E8 782 aa19.75■□□□□ 0.75
TRIM39-211ENST00000458516 RASGRP2Q7LDG7 609 aa19.74■□□□□ 0.75
TRIM39-211ENST00000458516 BRF1Q92994 677 aa19.74■□□□□ 0.75
TRIM39-211ENST00000458516 GOPCQ9HD26 462 aa19.74■□□□□ 0.75
TRIM39-211ENST00000458516 RLFQ13129 1914 aa19.74■□□□□ 0.75
TRIM39-211ENST00000458516 F5H6K3 240 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 NDUFB10O96000 172 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 GTF2A2P52657 109 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 AK2P54819 239 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 FGD1P98174 961 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 KLRC3Q07444 240 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 TMTC2Q8N394 836 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 BRPF3Q9ULD4 1205 aa19.73■□□□□ 0.75
TRIM39-211ENST00000458516 CCDC69A6NI79 296 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 CETPP11597 493 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 APOBRQ0VD83 1088 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 GRM1Q13255 1194 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 SLFN13Q68D06 897 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 NFXL1Q6ZNB6 911 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 ZNF654Q8IZM8 581 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 SPICE1Q8N0Z3 855 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 PROCA1Q8NCQ7 364 aaPredicted RBP19.72■□□□□ 0.75
TRIM39-211ENST00000458516 BRI3BPQ8WY22 251 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 LPAR1Q92633 364 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 ZIC5Q96T25 663 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 TMOD4Q9NZQ9 345 aa19.72■□□□□ 0.75
TRIM39-211ENST00000458516 CCL15-CCL14A0A0B4J2E2 113 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 TESPA1A2RU30 521 aaPredicted RBP19.71■□□□□ 0.75
TRIM39-211ENST00000458516 MANSC4A6NHS7 340 aaPredicted RBP19.71■□□□□ 0.75
TRIM39-211ENST00000458516 RAD21O60216 631 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 SNHG28P0DPA3 235 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 PDHBP11177 359 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 VCAM1P19320 739 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 EVCP57679 992 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 TROAPQ12815 778 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 NOGQ13253 232 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 CCL15Q16663 113 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 APOA5Q6Q788 366 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 MTMR7Q9Y216 660 aa19.71■□□□□ 0.75
TRIM39-211ENST00000458516 WDR33Q9C0J8 1336 aaKnown RBP19.71■□□□□ 0.75
TRIM39-211ENST00000458516 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 AOC2O75106 756 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 DDAH1O94760 285 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 VEGFBP49765 207 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 TREML2Q5T2D2 321 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 FASTKD5Q7L8L6 764 aaKnown RBP19.7■□□□□ 0.74
TRIM39-211ENST00000458516 CATIPQ7Z7H3 387 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 DCAF4Q8WV16 495 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 CHMP4CQ96CF2 233 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 GMCL1Q96IK5 515 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 NUP88Q99567 741 aaPredicted RBP19.7■□□□□ 0.74
TRIM39-211ENST00000458516 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
TRIM39-211ENST00000458516 MYL10Q9BUA6 226 aa19.7■□□□□ 0.74
TRIM39-211ENST00000458516 WDR46O15213 610 aaKnown RBP19.69■□□□□ 0.74
TRIM39-211ENST00000458516 KIF23Q02241 960 aaPredicted RBP19.69■□□□□ 0.74
TRIM39-211ENST00000458516 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
TRIM39-211ENST00000458516 FAM83BQ5T0W9 1011 aa19.69■□□□□ 0.74
TRIM39-211ENST00000458516 GPAT2Q6NUI2 795 aa19.69■□□□□ 0.74
TRIM39-211ENST00000458516 RAB11FIP4Q86YS3 637 aa19.69■□□□□ 0.74
TRIM39-211ENST00000458516 AGTPBP1Q9UPW5 1226 aa19.69■□□□□ 0.74
TRIM39-211ENST00000458516 SLC12A7Q9Y666 1083 aa19.69■□□□□ 0.74
TRIM39-211ENST00000458516 COL11A1P12107 1806 aaPredicted RBP19.69■□□□□ 0.74
TRIM39-211ENST00000458516 BTBD19C9JJ37 291 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 CD2BP2O95400 341 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms